 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT11154 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
bHLH |
| Protein Properties |
Length: 231aa MW: 25852.1 Da PI: 7.3876 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT11154 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 34.3 | 4.4e-11 | 63 | 116 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
r+++h++ Er R+++N+ +++Lr+llP + + +Kl +i+ ++++YI +Lq
EMT11154 63 RKMSHSAYERDSRKQLNEHYSNLRSLLPDdD--HHTRKLGNPTIVSRVIKYIPELQ 116
799**************************66..56666***************998 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MEHQMFNDPF TSSMSSLEAE IFSSGHHHLA PSPQWPGLDL DHDIPAAPAA NNATSSGGSR 60
SHRKMSHSAY ERDSRKQLNE HYSNLRSLLP DDDHHTRKLG NPTIVSRVIK YIPELQKEVD 120
GLEKKKEQLT RASCRPGDDT APIGSRPCLD DREIMVLLNT MAGALPMSKC IKVLENQGLC 180
LISSSASAFQ NRTFYSLHLQ RTQRTMSKEC STFCDELENA VKQKAGLHPH Y
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to the DNA motif 5'-CACGTGG-3' in the promoter of iron (Fe) deficiency-inducible genes as well as of genes involved in iron homeostasis, thus contributing to basal tolerance to iron deficiency, iron uptake from soil and iron transport, particularly during seed maturation and germination. Promotes the accumulation of mugineic acid family phytosiderophores (MAs). Required for ethylene-mediated signaling during iron deficiency responses. Improves growth and yield, especially in calcareous soil with low iron availability. Promotes iron concentration in shoots and grain. {ECO:0000250|UniProtKB:Q0JFZ0}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG670306 | 1e-145 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
