PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT11046 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 134aa MW: 14999.1 Da PI: 7.5713 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.1 | 1.8e-15 | 23 | 127 | 5 | 97 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykveP..wdLpk.....kvkaeek..ewyfFskr....dkkyatgkrknratksgyWkatgkdkev 92 +rFhP++ee+v +yL+++ ++ ++ v+++v+++++ +L + +++a+ + F++r d+ky+tg r+nr+t+sgyWk tg+dke+ EMT11046 23 YRFHPSNEEMVAHYLTPEFRKPYFSY-PVVADVNLTTASHgiFRLSAvlilnNLQARGSalMASSFCSRvedgDQKYPTGMRTNRVTRSGYWKVTGSDKEI 122 79*******************99888.77888887766541134443566664444444234456666534447899************************ PP NAM 93 lskkg 97 ++ +g EMT11046 123 FHDTG 127 99654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.148 | 19 | 134 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.66E-14 | 23 | 125 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-7 | 23 | 120 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence Send to blast |
MSNMAAVIDL GLEELQLALI LRYRFHPSNE EMVAHYLTPE FRKPYFSYPV VADVNLTTAS 60 HGIFRLSAVL ILNNLQARGS ALMASSFCSR VEDGDQKYPT GMRTNRVTRS GYWKVTGSDK 120 EIFHDTGQCM SSSA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M8BAJ6 | 9e-97 | M8BAJ6_AEGTA; Protein CUP-SHAPED COTYLEDON 2 | ||||
STRING | EMT11046 | 1e-97 | (Aegilops tauschii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G29035.1 | 1e-20 | NAC domain containing protein 3 |