 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT10885 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MIKC_MADS |
| Protein Properties |
Length: 190aa MW: 21169.9 Da PI: 6.0889 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT10885 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 51.2 | 1.6e-16 | 10 | 57 | 1 | 46 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEE..EEEE-TTSEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaeva..viifsstgkl 46
kri ++ r vtf+kRr ++lKKA L vLCd +v+ +++fsstgk+
EMT10885 10 KRIVDDASRRVTFCKRRGTLLKKARGLAVLCDDDVSlgLVVFSSTGKV 57
789999*************************99998446*******98 PP
|
| 2 | K-box | 32.7 | 3e-12 | 88 | 163 | 5 | 77 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGed.L..esLslkeLqqLeqqLekslkkiRskKnellleqi 77
++++++ ++++l e+a+L++ei+ L+ ++R+ Ge+ L + + eL+ L++++ ++l k+R +K +ll e++
EMT10885 88 QDTNQDGDHHQQLLAEVARLRQEIDHLEGSLRRQTGEEdLlsSGVTAAELHDLQHHVGSALGKVRHRKVHLLEEEM 163
556688899***************************75453345899*************************9885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MGRRGKLEVK RIVDDASRRV TFCKRRGTLL KKARGLAVLC DDDVSLGLVV FSSTGKVAGD 60
YCSPNTSWSD LIQRYEREST PSTQLQVQDT NQDGDHHQQL LAEVARLRQE IDHLEGSLRR 120
QTGEEDLLSS GVTAAELHDL QHHVGSALGK VRHRKVHLLE EEMLLATAAF LEVEVDMDME 180
ASTSLQPTLP
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. |
