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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
EMT10884 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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| Family |
MIKC_MADS |
| Protein Properties |
Length: 210aa MW: 23728.4 Da PI: 6.6287 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT10884 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 60.5 | 1.9e-19 | 10 | 58 | 1 | 47 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEE..EEEE-TTSEEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaeva..viifsstgkly 47
kri+++ rqvtf+kRr ++lKKA EL vLCd +v+ +++fsstgkl
EMT10884 10 KRIDDDGLRQVTFCKRRGTLLKKACELAVLCDDDVSlgLVVFSSTGKLA 58
79*****************************99998446********95 PP
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| 2 | K-box | 55.6 | 2.3e-19 | 98 | 186 | 8 | 97 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97
+ +++++++ +a+L++ei L+ ++R+ GedL s + eL+ Leqq+e++l k+R++K+ell +q+ el +k ++l++en+aL ++
EMT10884 98 DDDHHQQQQVLVGVARLRQEIGHLEASLRRQTGEDLPS-GVAELHDLEQQVESALGKVRQTKDELLNQQLGELHRKVQNLEDENNALLHM 186
34556667777899**********************88.9**********************************************9875 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MGRRGKLEVK RIDDDGLRQV TFCKRRGTLL KKACELAVLC DDDVSLGLVV FSSTGKLAGD 60
YCSPNTSWSE LIQRYERERE STSSTQLHVQ GRITNQNDDD HHQQQQVLVG VARLRQEIGH 120
LEASLRRQTG EDLPSGVAEL HDLEQQVESA LGKVRQTKDE LLNQQLGELH RKVQNLEDEN 180
NALLHMNADR QDRAAARGGP RQNSDWGRII
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