PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10148
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 315aa    MW: 34580.6 Da    PI: 6.2341
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10148genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.42.5e-27120180158
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               +dDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+r++edp +++++Y+geH++
  EMT10148 120 VDDGHSWRKYGQKDILGAKHPRGYYRCTHRksqGCAATKQVQRADEDPALFDVIYHGEHTC 180
               59***************************98899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-27114181IPR003657WRKY domain
PROSITE profilePS5081122.504115178IPR003657WRKY domain
SuperFamilySSF1182909.02E-25118180IPR003657WRKY domain
SMARTSM007741.6E-39120182IPR003657WRKY domain
PfamPF031064.7E-27121180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MESVDENGGS RLVVTELGYI KELVRQLDVN LGGCPDHCKR LAAQIFALTE RSIGMIRSGH  60
YDCRKRSAAG LDSPPFSATP SPLSDVSGMP FHNNKKRKTM EKRKHQVRVS SEGGGAETPV  120
DDGHSWRKYG QKDILGAKHP RGYYRCTHRK SQGCAATKQV QRADEDPALF DVIYHGEHTC  180
VHKTVATAAA GTPEPAEENP DARRHLQNLS TSLTAAGVLT TPQEHYPFSM PSTPENCFGQ  240
RASLSTSLEP SPVTSDSNRF SMNPFQAEWR AQSEYDEVVS ALVAAGTMPA LAMEMEEETA  300
FSLDEFEFDV SSFLA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-22120180868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3770660.0AK377066.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3147D20.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200629.10.0WRKY transcription factor WRKY62-like
TrEMBLM8C4T10.0M8C4T1_AEGTA; Putative WRKY transcription factor 53
STRINGEMT101480.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-33WRKY DNA-binding protein 46