 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT09911 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
NF-YC |
| Protein Properties |
Length: 265aa MW: 29345.6 Da PI: 4.7909 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT09911 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 38.8 | 2e-12 | 12 | 62 | 23 | 73 |
NF-YC 23 larikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrt 73
+ rikki++adedv +i+ +Pvl+ska elf+ +l r+++ + e+ +t
EMT09911 12 MPRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYNITVEKGVKT 62
56****************************************999987776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MADSYYFSDG IMPRIKKIMQ ADEDVGKIAL AVPVLVSKAL ELFLQDLCDR TYNITVEKGV 60
KTNVASKVPD LGAPDSSVDD KLGKRRKHGE DESEEESKRT RNEAACHTSN GRGRGRGRGR 120
GRRAGRGAER EIEHHELGCA QFSKPGHLKV EIGDVVLDTS ETKEHTPLSN ARASLRNIDL 180
NLDLADYEED TPQVQPSAPS APVVTVAPQV QTSGPSVSQL KEEVETKDFL GWQMPEMNKM 240
AMDPVQFALS SNHRLEEDED YDNEE
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 111 | 120 | RGRGRGRGRG |
| 2 | 111 | 121 | RGRGRGRGRGR |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK250593 | 0.0 | AK250593.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf92h11, mRNA sequence. |
