PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09665
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HD-ZIP
Protein Properties Length: 574aa    MW: 62825.1 Da    PI: 8.5352
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09665genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.42.1e-1758112256
               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
               rkR ++ ++q++eLe++F+++++p+++ r  L+k++g++  +Vk+WFqNrR  +k
  EMT09665  58 RKRGRHANHQIRELETMFQQCPHPDENLRIALSKRVGMDPLRVKFWFQNRRNAKK 112
               89999**********************************************8777 PP
2START62.71.1e-2022435088205
               T....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
     START  88 g....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe....sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
               g    g + lm+a l +lsp v+  +  f+R+++  ++g+w++vdvS+d     +     +     +++lpSg+li+++ ng++kv ++ ++++++   + 
  EMT09665 224 GcicqGGVILMNAGLRVLSPGVSsCNAKFLRQCQMIEQGVWAVVDVSLDAHGTSELrawnTGLPGACRVLPSGCLIKDMNNGYCKVAMIVNAEYDKGFMPP 324
               1444555678999999999999999************************9888887777534445679********************************* PP

               HHHHHHHHHHHHHHHHHHHHTXXXXX CS
     START 180 llrslvksglaegaktwvatlqrqce 205
               ll+ l++sg+ + a++w+  lqr ce
  EMT09665 325 LLHLLLSSGHTFSARRWLTSLQRRCE 350
               ***********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.5E-1649115IPR009057Homeodomain-like
PROSITE profilePS5007115.38654114IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.7E-1854121IPR009057Homeodomain-like
SMARTSM003897.4E-1756118IPR001356Homeobox domain
CDDcd000862.11E-1558115No hitNo description
PfamPF000467.5E-1558112IPR001356Homeobox domain
PROSITE patternPS00027089112IPR017970Homeobox, conserved site
SuperFamilySSF559614.81E-11204350No hitNo description
PROSITE profilePS5084817.522205354IPR002913START domain
PfamPF018521.4E-15229350IPR002913START domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MVGEWKPQNG QVRDEIDPSI PTDDKDFISS NTGMTDDDKD VATADEDTTG AGSASNMRKR  60
GRHANHQIRE LETMFQQCPH PDENLRIALS KRVGMDPLRV KFWFQNRRNA KKNQNERQQN  120
MVLRTENVML AEENRAMKAA MLKKTCPTCK GPMVFIKPLT PPELRRLHME NERLKAELLR  180
RTAYLHGVSA GTAGSCWQNC WLDCWLEPFP DIVSSVSASD IGHGCICQGG VILMNAGLRV  240
LSPGVSSCNA KFLRQCQMIE QGVWAVVDVS LDAHGTSELR AWNTGLPGAC RVLPSGCLIK  300
DMNNGYCKVA MIVNAEYDKG FMPPLLHLLL SSGHTFSARR WLTSLQRRCE FLAQRLSPAY  360
GISRAGGAIT PEGRNNALEL ARRMTESFYV AISAPRGEAW RKVADWRGRE SFQLAMHVLT  420
PLAAPGEQAA GPVLCPATTA RGRGRSSCNK KLILQQACSD APCMVVAYAP IDAGELKDVM  480
HGGSRASLSL LPSGFAILPD GVGDMQNDPL DANPSGVDPM DHQRSRGSLV SVLWQTPLVG  540
GNLTAQTVDN VGNNVSGSIM KIRAALHAKR VMTV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183090.10.0homeobox-leucine zipper protein ROC6-like
TrEMBLM8B7N00.0M8B7N0_AEGTA; Homeobox-leucine zipper protein ROC5
STRINGEMT096650.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4912422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.11e-50homeodomain GLABROUS 1