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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT08561 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
ARF |
Protein Properties |
Length: 586aa MW: 63945.1 Da PI: 7.3643 |
Description |
ARF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT08561 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 31.4 | 3.3e-10 | 44 | 105 | 1 | 57 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETT CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksg 57
f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr+ +g
EMT08561 44 FCKTLTASDTSTHGGFSVPRRAAEDCfapldyKQV-RPSQELVAKDLHGTQWRFRHIYRGERG 105
99****************************97444.34579*****************77665 PP
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2 | Auxin_resp | 102 | 7.6e-34 | 142 | 223 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83
+a++++++s+F+v++ Pr+++seF+v++++++k+l++++s+GmRfk + +++d++er+ +G+++g+s++dp+rWp+SkWr+L+
EMT08561 142 VASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHPFSIGMRFKDSNDSDDANERS-TGLISGISEVDPIRWPGSKWRCLQ 223
578899***************************************************9.9**********************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 586 aa
Download sequence Send
to blast |
MEQYPCELAN KMFRQNVRES ASEEGEDEMA GGDGEKKPRM PHMFCKTLTA SDTSTHGGFS 60 VPRRAAEDCF APLDYKQVRP SQELVAKDLH GTQWRFRHIY RGERGDDGEL RLGVRRAVQL 120 RNEALFRAVN SNESKLHTLS AVASSLENRS IFHVCFDPRS GASEFIVPYW RFSKSLNHPF 180 SIGMRFKDSN DSDDANERST GLISGISEVD PIRWPGSKWR CLQYFRDQVR WDDGNHCNHQ 240 RRVSPWEIER IGGSIQVNDC LSASSSKRAK LYFPQGNLDA PVTDGNDFPD PVETGSFHRV 300 LQGQELLMGS RAQGAARSRS PDVAKFRPPD HQRFSANAGS YMPQQSPAEF PYHSSGFGES 360 LGFPEVLQGQ EMSRALRFYS QGSAFDARAQ HGPFGYAQRS AAPGGLSPAA QGYALGQFTP 420 SSAAAKVSSP SSVLMFNQAT VPQFDLEGRT SGYRGAYGGQ CPPGIEMVRE TEEAWPCAQR 480 RTPSVTGTGC RRFEEWIMAS TPARADGGRP RSAAAGDVVG RRSCRLVGVS LTDQKGLGGA 540 GEGAAKEGDA ADEAVEGADP RGLDLFGRGH PAPAALHAIV AAPLGM
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Functional Description ? help
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Source |
Description |
UniProt | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Down-regulated by auxin under light condition. {ECO:0000269|PubMed:17408882}. |