PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08499
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 357aa    MW: 38333.9 Da    PI: 11.083
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08499genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.17.4e-23290333345
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSST CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedp 45 
               D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++ +
  EMT08499 290 DEYSWRKYGQKPIKGSPHPRGYYKCSTVrGCPARKHVERCNRKE 333
               9************************9888**********99543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.8E-18241286IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.805.6E-24276336IPR003657WRKY domain
PROSITE profilePS5081123.755283338IPR003657WRKY domain
SuperFamilySSF1182902.75E-19286333IPR003657WRKY domain
SMARTSM007748.4E-21288339IPR003657WRKY domain
PfamPF031065.5E-19290333IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEEVEAANSA AVESCHKLLA LLSQQQDPAL LRSIASETGE ACAKFRKVVS LLSNGGGGRG  60
GHARGRFSRR RKPVGFLSQK GFLESSSNTP LGMLMSGSAA TPSPSAGSAG QLRPQVGAPP  120
QPRRSLDLIS SSSKSAHQFG PPKMVQPLSV QFQFGATAHR YPFQQQQQNL QAQMFKRSNS  180
GISLKFDSPS GGTGTISSPR SFMSSLSMDG SVASLDGKPP MRLLGGPAVS DPLNVRQCAP  240
KRRCTGRGED GSGKCTTGGK CHCSKRRKLR IKRSIKVPAI SNKISDIPPD EYSWRKYGQK  300
PIKGSPHPRG YYKCSTVRGC PARKHVERCN RKEVAVISQS CFNFSVKLSM LAVVTLT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-12276338263WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3747470.0AK374747.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3075F07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163784.10.0protein WRKY1-like
TrEMBLM8BNY80.0M8BNY8_AEGTA; Putative WRKY transcription factor 74
STRINGEMT084990.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28593887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.12e-47WRKY DNA-binding protein 74