PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

EMT07921

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

FAR1

Protein Properties

Length: 932aa MW: 102978 Da PI: 7.5246

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT07921	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.6	7.2e-07	787	865	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn ++ e GF +r k + + + + +++ vC +++ + r++C +++ + +d+ w++ + +++HnH+l+p EMT07921 787 DFYNVFSWEKGFGIRYGKGRLNVERT-KCMQEIVCGYAPVL-----------ENTRSCRCNCPVLIRLLRLEDNGWYIVEHREKHNHSLSP 865 69999******9999988874433.45566777544333...........34567799999999999999**************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.10.25.10	8.2E-4	216	256	No hit	No description
Gene3D	G3DSA:2.60.120.200	6.6E-10	276	378	IPR013320	Concanavalin A-like lectin/glucanase domain
PROSITE profile	PS50011	24.683	282	614	IPR000719	Protein kinase domain
SuperFamily	SSF56112	4.92E-55	337	602	IPR011009	Protein kinase-like domain
SMART	SM00220	8.6E-12	357	605	IPR000719	Protein kinase domain
Pfam	PF00069	2.5E-29	402	599	IPR000719	Protein kinase domain
Gene3D	G3DSA:1.10.510.10	1.7E-38	408	612	No hit	No description
PROSITE pattern	PS00108	0	453	465	IPR008271	Serine/threonine-protein kinase, active site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence Send to blast
MGLRPLGASA WHGLAAQISV ATSASRTRLA LEKAASKNPL MSHAMGPGHI SAQTDLGYWT 60 SVLPWASFQH QEQVDINRLY GLAMVVGQAK GKNQLEYLTA DSCISYCMDI SSIGNGTECS 120 GTGCCRAPVS GNINAFGAQS VPVSAIYNST IQSFSPCTYS FVAEDDWFKF DRSYINSTNF 180 GRKYTDGVPL VLDWVVGNGS CSETSKMGSQ YACQAMNSEC IDVSNGPGYR CNCSQGYEGN 240 PYLQGGCKDI NECEPPNQSL YPCKGFRSDD PKSIPCVQAD PNKALKVALG TSAGVVFLMV 300 CMFALQAEYQ KRKLAKEKER FFDQNGGQIL YHQIMSKQVD TLMIFTQEDL KKATNDFDES 360 REVGRGGHGT VYKGVLKDGR RLSYFHRPTT GMWSGLEVEV PILVYEFIPN GTLFEFIHRN 420 RGTPPPSLDT RLRAAQESAE ALAYLHLSMN RPIVHGDVKS MNILLDENYM AKVTDFGASR 480 TLPKNEVQFM TLVQGTLGYL DPEYLQERQL MEKSDVYSFG IVLLELITGK TAIYHDVPKE 540 VKSLASSFLL VMKEESLDGI LDASILSAGM ETLLREVAEL ARMCLSTRGE ERPSMTQVAD 600 KLKALRSTWR EKFLLMDDET ERLVSAPAAL AFHDPLSSIM FSTGPRMSGI VHTKFTQKGF 660 YVKLRGLHLL LLTVRFRILE GMDGTDRPPE PGEYAVPAIE SGAPSTPTME VEAAGGDTQA 720 QLVVAALGPP AASQQATGKV NPEAPEWKKR VRVGSAAPGR TPCPTRASAL ENAIRSFADN 780 PGDEAYDFYN VFSWEKGFGI RYGKGRLNVE RTKCMQEIVC GYAPVLENTR SCRCNCPVLI 840 RLLRLEDNGW YIVEHREKHN HSLSPNCGET IRWPSHKRIE AYNKDLGKQL KKNIFNLSKI 900 YSIIGSFFGS MEKAPFTKQS LKTLCGKLGP EQ

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence Send to blast

MGLRPLGASA WHGLAAQISV ATSASRTRLA LEKAASKNPL MSHAMGPGHI SAQTDLGYWT  60
SVLPWASFQH QEQVDINRLY GLAMVVGQAK GKNQLEYLTA DSCISYCMDI SSIGNGTECS  120
GTGCCRAPVS GNINAFGAQS VPVSAIYNST IQSFSPCTYS FVAEDDWFKF DRSYINSTNF  180
GRKYTDGVPL VLDWVVGNGS CSETSKMGSQ YACQAMNSEC IDVSNGPGYR CNCSQGYEGN  240
PYLQGGCKDI NECEPPNQSL YPCKGFRSDD PKSIPCVQAD PNKALKVALG TSAGVVFLMV  300
CMFALQAEYQ KRKLAKEKER FFDQNGGQIL YHQIMSKQVD TLMIFTQEDL KKATNDFDES  360
REVGRGGHGT VYKGVLKDGR RLSYFHRPTT GMWSGLEVEV PILVYEFIPN GTLFEFIHRN  420
RGTPPPSLDT RLRAAQESAE ALAYLHLSMN RPIVHGDVKS MNILLDENYM AKVTDFGASR  480
TLPKNEVQFM TLVQGTLGYL DPEYLQERQL MEKSDVYSFG IVLLELITGK TAIYHDVPKE  540
VKSLASSFLL VMKEESLDGI LDASILSAGM ETLLREVAEL ARMCLSTRGE ERPSMTQVAD  600
KLKALRSTWR EKFLLMDDET ERLVSAPAAL AFHDPLSSIM FSTGPRMSGI VHTKFTQKGF  660
YVKLRGLHLL LLTVRFRILE GMDGTDRPPE PGEYAVPAIE SGAPSTPTME VEAAGGDTQA  720
QLVVAALGPP AASQQATGKV NPEAPEWKKR VRVGSAAPGR TPCPTRASAL ENAIRSFADN  780
PGDEAYDFYN VFSWEKGFGI RYGKGRLNVE RTKCMQEIVC GYAPVLENTR SCRCNCPVLI  840
RLLRLEDNGW YIVEHREKHN HSLSPNCGET IRWPSHKRIE AYNKDLGKQL KKNIFNLSKI  900
YSIIGSFFGS MEKAPFTKQS LKTLCGKLGP EQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2qkw_B	2e-43	349	606	33	315	Protein kinase
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020147731.1	0.0	wall-associated receptor kinase 2-like isoform X1
TrEMBL	M8B1P3	0.0	M8B1P3_AEGTA; Wall-associated receptor kinase 3
STRING	EMT07921	0.0	(Aegilops tauschii)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	5e-06	FAR1-related sequence 7