PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06885
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 186aa    MW: 20960.5 Da    PI: 6.1679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06885genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-101111501054
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               +rRR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k L
  EMT06885 111 KRRRHKINERLRVLQHLIPNG-----TKVDISTMLEEAVHYVKFL 150
               9******************97.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.145101150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-13105165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-9107156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-12108161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.59E-10110155No hitNo description
PfamPF000102.1E-7111150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MEAAECSSIW GSLEAICEES EMIAHLQSVL WCGSDSDANL CSSENDSTKA SFDLLVDDLG  60
SANERNTGIK RKMHVDEQSD HHNEVRVALS TARKSGNKSR AGLDSQSNYA KRRRHKINER  120
LRVLQHLIPN GTKVDISTML EEAVHYVKFL HLQIKLLSSD EMWMYAPLAY DSINVRLPHL  180
DSLAHE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163880.11e-114transcription factor bHLH139-like
TrEMBLM8AYW81e-134M8AYW8_AEGTA; Transcription factor bHLH84
STRINGEMT068851e-135(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145082123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-38bHLH family protein