![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
EMT06297 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
C2H2 |
Protein Properties |
Length: 284aa MW: 31034.1 Da PI: 11.2609 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT06297 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Ata&pid=EMT06297) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 18.7 | 4.6e-06 | 123 | 145 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ Cg++F+ ++L++H+ + H
EMT06297 123 PCSQCGEVFTKADSLEQHQAVrH 145
799****************9888 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MALSALLLPS STTTADTSDR RRGQQPQPPQ QQQNHHSKRK KKPPSLPPPL SPAPRTPGRR 60 HLAATGTPSR KSPALAAPTA GAKARLVAGK DHRQRRSGSK KAAAQKPARP ASSRYPRPRE 120 LCPCSQCGEV FTKADSLEQH QAVRHAVSEL GPEDSGRNIV EIIFKSSWQK RDRPICHIDR 180 ILKVRNPPRT VARFEAYRDA VRARCRADAA GAGGRRRRRG GGRHEVRRRD GDGEEGKEEA 240 GPFDSVAGDD AGGAYGVLEE LFVANPRAIL PCFVVVYRVD VDAQ
|
Nucleic Localization
Signal ? help
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![NLS](draw_nls.php?sp=Ata&pid=EMT06297) |
No. |
Start |
End |
Sequence |
1 | 19 | 41 | RRRGQQPQPPQQQQNHHSKRKKK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT085607 | 1e-102 | BT085607.2 Zea mays full-length cDNA clone ZM_BFc0038L11 mRNA, complete cds. |