PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT05947

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

NAC

Protein Properties

Length: 360aa MW: 40246.6 Da PI: 4.7324

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT05947	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	150.4	8.6e-47	19	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k....kvka...eek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppG+rFhPtd+elv+ +Lk+k+ g +++l ++i+ vd+y++eP +Lp k + + + k ewyfF++r +ky+tg r +rat +g+Wk+tgkd++v EMT05947 19 LPPGYRFHPTDHELVNWFLKRKLLGLPIDL-DFIPVVDVYRFEPDQLPdKsfspS--TgdpGAKvEWYFFAPRVRKYPTGLRMERATLKGFWKSTGKDRPV 116 79**************************.99**********95456551..13343336******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g +vg+kktLvf+ g+ap+g++t+Wvmheyrl EMT05947 117 IH-NGIVVGMKKTLVFHIGKAPRGTRTNWVMHEYRL 151 .99*****************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	7.06E-57	12	169	IPR003441	NAC domain
PROSITE profile	PS51005	53.193	19	169	IPR003441	NAC domain
Pfam	PF02365	4.4E-25	20	151	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence Send to blast
MACVTVPAAT AEMERAFALP PGYRFHPTDH ELVNWFLKRK LLGLPIDLDF IPVVDVYRFE 60 PDQLPDKSFS PSTGDPGAKV EWYFFAPRVR KYPTGLRMER ATLKGFWKST GKDRPVIHNG 120 IVVGMKKTLV FHIGKAPRGT RTNWVMHEYR LHPDHRIHDT YVLCRIFNKN TMTQSPDLLS 180 GVDMDEEGMH LVANNADMDN EGFQPMSGGA NASKEAIHPV FHNANTDKEG INPVSGNIVG 240 DMEGIYPMPG DIFADMAGVH PMFGGAVPHN EETDPMSDSV VRDMEGIHPV SDSFIPDMEG 300 IHPVFGGAVP HNEETDPMSA GVYTDVDFSW MQLVPDDICC PNIELDKDDS CTELINDYMW

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence Send to blast

MACVTVPAAT AEMERAFALP PGYRFHPTDH ELVNWFLKRK LLGLPIDLDF IPVVDVYRFE  60
PDQLPDKSFS PSTGDPGAKV EWYFFAPRVR KYPTGLRMER ATLKGFWKST GKDRPVIHNG  120
IVVGMKKTLV FHIGKAPRGT RTNWVMHEYR LHPDHRIHDT YVLCRIFNKN TMTQSPDLLS  180
GVDMDEEGMH LVANNADMDN EGFQPMSGGA NASKEAIHPV FHNANTDKEG INPVSGNIVG  240
DMEGIYPMPG DIFADMAGVH PMFGGAVPHN EETDPMSDSV VRDMEGIHPV SDSFIPDMEG  300
IHPVFGGAVP HNEETDPMSA GVYTDVDFSW MQLVPDDICC PNIELDKDDS CTELINDYMW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-45	17	175	15	171	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-45	17	175	15	171	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-45	17	175	15	171	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-45	17	175	15	171	NO APICAL MERISTEM PROTEIN
3swm_A	1e-45	17	175	18	174	NAC domain-containing protein 19
3swm_B	1e-45	17	175	18	174	NAC domain-containing protein 19
3swm_C	1e-45	17	175	18	174	NAC domain-containing protein 19
3swm_D	1e-45	17	175	18	174	NAC domain-containing protein 19
3swp_A	1e-45	17	175	18	174	NAC domain-containing protein 19
3swp_B	1e-45	17	175	18	174	NAC domain-containing protein 19
3swp_C	1e-45	17	175	18	174	NAC domain-containing protein 19
3swp_D	1e-45	17	175	18	174	NAC domain-containing protein 19
4dul_A	1e-45	17	175	15	171	NAC domain-containing protein 19
4dul_B	1e-45	17	175	15	171	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020175154.1	0.0	NAC transcription factor 29-like
TrEMBL	A0A453DME3	0.0	A0A453DME3_AEGTS; Uncharacterized protein
STRING	EMT05947	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4363	21	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	5e-60	NAC domain containing protein 57