 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
EMT05789 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
ERF |
Protein Properties |
Length: 279aa MW: 29897.5 Da PI: 7.6738 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT05789 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 109 | 160 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+++AeIrd + r +r++lg+f ta+eAa a++ a+++++g+
EMT05789 109 SYRGVRRRP-WGKFAAEIRDTRR---RgARVWLGTFATADEAALAYDVAALRMRGP 160
69*******.**********433...24**************************95 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006457 | Biological Process | protein folding |
GO:0009408 | Biological Process | response to heat |
GO:0009644 | Biological Process | response to high light intensity |
GO:0010200 | Biological Process | response to chitin |
GO:0042542 | Biological Process | response to hydrogen peroxide |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MAIGAPRDTS NILEDVWATI MTETPSGCTP MPASSTSFVD QAGAEILQRL PSLGGGISMG 60 ADEWGELLSV ADAATPPVAE QPPLAAASPR GGEGQQSAAA GSKAALPKSY RGVRRRPWGK 120 FAAEIRDTRR RGARVWLGTF ATADEAALAY DVAALRMRGP RAHLNFPIEK VQRRLDLERD 180 NGQFLDAADH PTGRARRKRR RRSSATATDH ARTVDADVTA AYGGSDQMVS FTNSGRGHGT 240 PAVQDRRVMS ADVGGAVDRV IELEEIGGEY WDYLFPPVL
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 195 | 201 | RRKRRRR |
2 | 196 | 200 | RKRRR |
3 | 196 | 202 | RKRRRRS |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KJ727710 | 2e-56 | KJ727710.1 Zea mays clone pUT5649 AP2-EREBP transcription factor (EREB165) gene, partial cds. |
GenBank | KU685412 | 2e-56 | KU685412.1 Saccharum spontaneum clone SES23E05, complete sequence. |