PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05677
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HD-ZIP
Protein Properties Length: 732aa    MW: 79795.8 Da    PI: 6.6669
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05677genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.28.9e-212883156
              TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
              r++ +++t+ q+++Le++F+++++p++++r+ L+++lgL+ rq+k+WFqNrR+++k
  EMT05677 28 RKRYHRHTPRQIQTLEAMFKECPHPDEAQRANLSRELGLEARQIKFWFQNRRTQMK 83
              789999***********************************************998 PP
2START142.34.6e-452424673206
               HHHHHHHHHHHHHHC-TT-EEEE........EXCCTTEEEEEEESSS.....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
     START   3 aeeaaqelvkkalaeepgWvkss........esengdevlqkfeeskv....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
               a +a++el+++ + ++++Wvk +        + + +d  ++k+ +s++     ++e +r+s++v m +++lve ++d + ++ e ++     a +++ + +
  EMT05677 242 ATRAMDELIRLTQQGDNVWVKIPggdgretiDVQAYDSIYSKPGSSNFragdIRVEGSRDSAIVCMSPVNLVEVFMDPS-KFMEFFPsivsHARITDPLVN 341
               6789**********************999999999999****999999999999*************************.999999955545555555566 PP

               T.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHHH CS
     START  88 g.....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwll 181
               g     + l+ m+ +lq+++p+vp R+f f+Ry+rq  +g w+i+dvS d +++    ++  R+++lpSg+li ++ ng+skvtwveh++ ++++p   l+
  EMT05677 342 GlngrnESLVMMYEQLQFMTPAVPtREFSFLRYCRQIDQGMWAIADVSADMQREAHYGAPPPRSRRLPSGCLIADMTNGYSKVTWVEHMEIEDKSPiGPLY 442
               6****************************************************9988999***************************************** PP

               HHHHHHHHHHHHHHHHHHTXXXXXX CS
     START 182 rslvksglaegaktwvatlqrqcek 206
               r +v+sg+a+ga +wva+l+r ce+
  EMT05677 443 RDIVQSGAAFGAHRWVAALHRACER 467
               ***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.67E-191385IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.5E-211479IPR009057Homeodomain-like
PROSITE profilePS5007117.752585IPR001356Homeobox domain
SMARTSM003897.2E-202689IPR001356Homeobox domain
CDDcd000861.87E-192786No hitNo description
PfamPF000462.5E-182883IPR001356Homeobox domain
PROSITE patternPS0002706083IPR017970Homeobox, conserved site
PROSITE profilePS5084843.593231470IPR002913START domain
SuperFamilySSF559612.88E-31234469No hitNo description
CDDcd088752.12E-91235466No hitNo description
SMARTSM002341.1E-27240467IPR002913START domain
Gene3DG3DSA:3.30.530.202.7E-7241467IPR023393START-like domain
PfamPF018529.2E-37242467IPR002913START domain
SuperFamilySSF559616.0E-16488724No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009828Biological Processplant-type cell wall loosening
GO:0010091Biological Processtrichome branching
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 732 aa     Download sequence    Send to blast
MDFGDDQEGG SESNQHQHHQ QQNQNQRRKR YHRHTPRQIQ TLEAMFKECP HPDEAQRANL  60
SRELGLEARQ IKFWFQNRRT QMKAQHERQD NCFLRQENDK IRCENIAMRE ALKNVICPTC  120
GGPPIAEDYF DEQKLRMENA RLKQELDSVA GLTAKYLGRP FTQLPQGTPQ MNVSSLDLSM  180
GGVPMGGVPM GGGHHQQFGG GLSLDLDLLS GAGLGMPLSD MPTMHLPAPV TEKERPLLAK  240
MATRAMDELI RLTQQGDNVW VKIPGGDGRE TIDVQAYDSI YSKPGSSNFR AGDIRVEGSR  300
DSAIVCMSPV NLVEVFMDPS KFMEFFPSIV SHARITDPLV NGLNGRNESL VMMYEQLQFM  360
TPAVPTREFS FLRYCRQIDQ GMWAIADVSA DMQREAHYGA PPPRSRRLPS GCLIADMTNG  420
YSKVTWVEHM EIEDKSPIGP LYRDIVQSGA AFGAHRWVAA LHRACERYAS SLEVPGVMHG  480
ETTGVTAEGR RSMMALSQRM VSSFCGGMTA SPQHQWTTMP GAAGNEVCVR VSMNQGAQPG  540
HPNGVVLGAA TSVWLPVPAD HVFGFLRDEN TRTQWDVLCK ENSVQPVSRI PNGPNPGNCI  600
TLLRALSPSQ APQGGQATML VLQESCTDTS GCSMVVHSPI DIPAANMMMS GADPSGIPLL  660
PSGFAIWPAG VGGGASTSAA ATPMAAGCIV SVAFQILISS LPSSKLNAES IATVNNLVST  720
TVQNIKAALN CV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00232DAPTransfer from AT1G73360Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020150479.10.0homeobox-leucine zipper protein ROC8-like
SwissprotQ69T580.0ROC8_ORYSJ; Homeobox-leucine zipper protein ROC8
TrEMBLA0A3B6TMZ50.0A0A3B6TMZ5_WHEAT; Uncharacterized protein
TrEMBLM8BRU20.0M8BRU2_AEGTA; Homeobox-leucine zipper protein ROC8
STRINGEMT056770.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29123770
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17920.10.0homeodomain GLABROUS 12