PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05641
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family FAR1
Protein Properties Length: 1115aa    MW: 124326 Da    PI: 6.4776
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05641genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.41.5e-1010441093151
      FAR1    1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke 51  
                ++Yn+YA +vGFs+rk+++k++ ++g+i+++   Cs+eg+re+ ++k++++
  EMT05641 1044 DMYNTYAGKVGFSIRKNQTKRR-HDGSIYQKYIICSNEGHRETASSKDTTR 1093
                58**************998776.9999***************998884433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF128193.5E-9840374IPR024788Malectin-like carbohydrate-binding domain
SuperFamilySSF520583.47E-15406525IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.107.4E-18411518IPR032675Leucine-rich repeat domain, L domain-like
PfamPF127993.8E-7456490IPR025875Leucine rich repeat 4
PROSITE profilePS514507.142456478IPR001611Leucine-rich repeat
PRINTSPR000194.8E-6457470No hitNo description
PRINTSPR000194.8E-6476489No hitNo description
PROSITE profilePS514506.079479500IPR001611Leucine-rich repeat
Gene3DG3DSA:2.60.120.2004.5E-11523608IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF561124.51E-76577862IPR011009Protein kinase-like domain
PROSITE profilePS5001137.149595866IPR000719Protein kinase domain
SMARTSM002207.1E-35595866IPR000719Protein kinase domain
PfamPF077149.4E-48597862IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
CDDcd140666.33E-85601863No hitNo description
PROSITE patternPS001070601623IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:3.30.200.202.9E-22609672No hitNo description
Gene3DG3DSA:1.10.510.104.4E-41674885No hitNo description
PROSITE patternPS001080715727IPR008271Serine/threonine-protein kinase, active site
PfamPF031011.8E-710451092IPR004330FAR1 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0016021Cellular Componentintegral component of membrane
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1115 aa     Download sequence    Send to blast
MAISHCSAST KLAWILALLL ILVTTTIQVH CQSPPGFISI DCGFTNTSAY NDSITGIQFD  60
PDSRFVEGGL SNKISAEFIA GSDEQQKTLR SFPNGSRNCY TLPSTTGTKY MLRATFTYGN  120
YDGLNKTRDG SLFLFGLHIG VNFWEAVNMT NWDPSSTIWK EIITVAPANS VSVCLINFGS  180
GTPFVSALEL RPLQDLMYPF VNTSVSISYF RRIRFGAATD FITRFSLDPY DRFWEGWPFT  240
YPWIPLNTSS RVRRLPGDNT FQVPEGILQG ATTLDTNYSF LEISVGVGPN LDAKNLQLLP  300
IFHFAEINSS NPSRRFDIYS NDELLFADFS PSRFQADSMH QNGRFLHNPT ATFRLSKTRR  360
SRLPPLINAF ELYSLVRMDN LTTDSDDVNY IKEVTKHYNL ARINWNGDPC SPREYSWEGL  420
TCDYSKSNQN PRIVAVNLST SGLKGGLVIS FMNMVSLENL DLSHNNLTGA IPDYQIKSLK  480
VLDLSYNQLD GPIPDSILQR SQAGLLDLRL EGNPICSKVK DTYCSNKKKK TSTVLIAVIV  540
PVVLVSLLVV MGILWKLYWK GKSGDDEDYA MYEEETPLHI DIRRFTYAEL KLITNNFQSI  600
IGKGGFGIVY HGTLENGDEV AVKVLMETSI AESTDFLPEV QTLSKVHHKN LVTLQGYCQN  660
KKCLALVYDF MPRGNLQQLL KGGDDYSLTW EQRLYIALDA AQGLEYLHES CTPSIVHRDV  720
KTPNILLDKN LVGVISDFGL SRAFNDAHTH ISTVAAGTLG YLDPEYHATF QLTVKTDVYS  780
FGIVLLEIIT GQSPVFMDPQ TVHLPNWVRQ KIAKGSIHDV VDKRLLDQYD ASSLQGAVDL  840
ALNCVENAAI DRPTMTEVVS RLKTWLPAVS SDKQSTSGTP RRKYSMNTEM PKQFKLMISG  900
ACPPPIQHQS DRELLMDEQP EQCPPRDATS RQFLGPRLTA AGGTIAMSSG RPNTSSPLHD  960
RIVLSQSEAE LQSRRSGVAM PDATTCTMDL PPPQVMSTEG QQDDAGADDR GAGEEQTLQV  1020
NKDGQTLIVP EVGKTYDSEE AAYDMYNTYA GKVGFSIRKN QTKRRHDGSI YQKYIICSNE  1080
GHRETASSKD TTRRVAMPVF SLVLAERGFG RCKRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4q5j_A1e-6358287629330Protein BRASSINOSTEROID INSENSITIVE 1
4q5j_B1e-6358287629330Protein BRASSINOSTEROID INSENSITIVE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146331.10.0probable LRR receptor-like serine/threonine-protein kinase At1g51810
TrEMBLM8AM950.0M8AM95_AEGTA; Putative LRR receptor-like serine/threonine-protein kinase
STRINGEMT056410.0(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.21e-15WRKY family protein