 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT05112 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
NAC |
| Protein Properties |
Length: 206aa MW: 22485.9 Da PI: 8.3067 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT05112 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 78.4 | 1.6e-24 | 26 | 100 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + w++F+ r+ +a+g r++r+t sgyWka g+ v+s++g+ vg+kkt+vfy+grap g kt+W m+eyr+
EMT05112 26 HGEPWFYFCARQDGEARGGRPSRTTPSGYWKAAGTPGLVYSADGRPVGTKKTMVFYRGRAPAGAKTKWKMNEYRA 100
5678*********************************************************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MGELPAGYRF YPTEEELVHR GACAGHGEPW FYFCARQDGE ARGGRPSRTT PSGYWKAAGT 60
PGLVYSADGR PVGTKKTMVF YRGRAPAGAK TKWKMNEYRA FDDDGEERVQ LVPAVHKVRQ 120
LAARRPCTAA AGGCRSEDPA SSSAALASPN QDVEVGKGQK RKRHAANDVP SSSDAYRSVQ 180
QQQKQGGADE ELADGMTDWA ELFDWV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-21 | 4 | 102 | 17 | 144 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-21 | 4 | 102 | 17 | 144 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-21 | 4 | 102 | 17 | 144 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-21 | 4 | 102 | 17 | 144 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swm_B | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swm_C | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swm_D | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swp_A | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swp_B | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swp_C | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 3swp_D | 7e-21 | 4 | 102 | 20 | 147 | NAC domain-containing protein 19 |
| 4dul_A | 7e-21 | 4 | 102 | 17 | 144 | NAC domain-containing protein 19 |
| 4dul_B | 7e-21 | 4 | 102 | 17 | 144 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK359954 | 2e-95 | AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05. |
