 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT05070 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
bHLH |
| Protein Properties |
Length: 247aa MW: 26665.4 Da PI: 6.6479 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT05070 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 21.9 | 3.2e-07 | 82 | 148 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC..................TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkas...............kapskKlsKaeiLekAveYIksLq 55
+ +E++RR +++ +L +l+P +s + ++ + + L A YIk+L+
EMT05070 82 ERKDVEKNRRLHMKGLCLKLSSLVPASSthhlrhyssssssppSSNKDAATQLDQLDSAAAYIKQLR 148
56889*********************777************96666666****************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MEIQGSRPPE FACPAPYKEF DEAADEVWGK TDDEEDIAVP AKATHNRHDH EASTRQSDRG 60
GAAAGAMALD GSHHTTSSGK MERKDVEKNR RLHMKGLCLK LSSLVPASST HHLRHYSSSS 120
SSPPSSNKDA ATQLDQLDSA AAYIKQLRAR IEDLKRRKQA ALSGNTVGCS SSVSAGDYKS 180
QTAALPVIEV RHQDGTLDVA LASEAGRPFR LHEVMAVLEQ EGAEVSQRLV NNDRSNNAQV 240
SNHAGDC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG670306 | 1e-84 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
