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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT04698 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MIKC_MADS |
Protein Properties |
Length: 235aa MW: 26930.3 Da PI: 6.6084 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT04698 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 85.7 | 2.6e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+rien++ rqvtfskR+ g++KKA EL vLCda+vav++fs+tg+ly+ys+
EMT04698 9 ERIENTTSRQVTFSKRKSGLFKKARELGVLCDAQVAVVLFSNTGRLYDYSN 59
69***********************************************95 PP
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2 | K-box | 81.4 | 2.1e-27 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98
++a+a+ +q e ++L+++++nLq+++R+llG+ L+ L l++++ Le+qLe+s+ +iR +K++l++++ieel kke +++en +L+kkl
EMT04698 82 SASAEAKFWQAEGERLRQQLHNLQENHRQLLGQHLSGLGLEDMRGLESQLETSIHNIRLTKDQLMIDEIEELNKKESLVHQENIELHKKL 171
678899**********************************************************************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MVRGKTVIER IENTTSRQVT FSKRKSGLFK KARELGVLCD AQVAVVLFSN TGRLYDYSNC 60 NSGMKSIIER YQHVKEGQQF MSASAEAKFW QAEGERLRQQ LHNLQENHRQ LLGQHLSGLG 120 LEDMRGLESQ LETSIHNIRL TKDQLMIDEI EELNKKESLV HQENIELHKK LNIIRQENIY 180 LQNKLNGEAE VNGTITSSSS QYSTAAREDP VRLELSHPDH AERDEQPELP MLGYG
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK371442 | 0.0 | AK371442.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2134C13. |