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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT04483 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MYB |
Protein Properties |
Length: 281aa MW: 31350.8 Da PI: 5.7871 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT04483 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.7 | 2.3e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl
EMT04483 13 RGPWTVDEDLTLINYIADHGEGRWNALARAAGLRRTGKSCRLRWLNYL 60
89********************************************97 PP
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2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
EMT04483 66 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 109
89********************.*********.***********96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0016036 | Biological Process | cellular response to phosphate starvation |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
Sequence ? help Back to Top |
Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MAAEPEEEAE LRRGPWTVDE DLTLINYIAD HGEGRWNALA RAAGLRRTGK SCRLRWLNYL 60 RPDVKRGNFT ADEQLLILDL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR VQKHAKQLNC 120 DVGSATFKDA MRYLWMPRLV ERIHATAAPT GGDPTIGDTS CASGVTSMAT TAATATTYPE 180 NNSPSSAVTT SRSASSGSFT SELCGEEKNL HVHGSGEKTT SGGDWMQDAD QEFWAMHMQI 240 QPDEGGLFHV DHELSGWVQG FSDVGVSADN LWSLEDIWKM Q
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in the jasmonate-dependent defense responses to the rice blast fungus Magnaporthe oryzae. Does not seem to function in the salicylic acid-dependent signaling pathway. {ECO:0000269|PubMed:11310740}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA), wounding and infection by the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:11310740}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT009018 | 0.0 | BT009018.1 Triticum aestivum clone wdk3c.pk006.n12:fis, full insert mRNA sequence. |
Publications
? help Back to Top |
- Ahn IP,Kim S,Kang S,Suh SC,Lee YH
Rice Defense Mechanisms Against Cochliobolus miyabeanus and Magnaporthe grisea Are Distinct. Phytopathology, 2005. 95(11): p. 1248-55 [PMID:18943354] - Campos-Soriano L,García-Martínez J,San Segundo B
The arbuscular mycorrhizal symbiosis promotes the systemic induction of regulatory defence-related genes in rice leaves and confers resistance to pathogen infection. Mol. Plant Pathol., 2012. 13(6): p. 579-92 [PMID:22212404] - Yokotani N, et al.
Role of the rice transcription factor JAmyb in abiotic stress response. J. Plant Res., 2013. 126(1): p. 131-9 [PMID:22847900] - Wang D, et al.
Expression analysis of innate immunity related genes in the true/field blast resistance gene-mediated defence response. Biotechnol. Biotechnol. Equip., 2014. 28(6): p. 999-1007 [PMID:26740780] - Fred AK,Kiswara G,Yi G,Kim KM
Screening Rice Cultivars for Resistance to Bacterial Leaf Blight. J. Microbiol. Biotechnol., 2016. 26(5): p. 938-45 [PMID:26869604]
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