PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03825
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family LBD
Protein Properties Length: 265aa    MW: 29350.1 Da    PI: 4.0796
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03825genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26031.16.4e-1014358100
    DUF260  58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
               m++l+y+Ae+ra dPv G++++i +l++  e l+aela+l+++
  EMT03825   1 MQTLIYQAEMRAMDPVGGCCRMIIDLEHTSELLSAELAALQQH 43 
               89*************************************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031953.8E-7141IPR004883Lateral organ boundaries, LOB
PROSITE profilePS508918.626144IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MQTLIYQAEM RAMDPVGGCC RMIIDLEHTS ELLSAELAAL QQHLDMCRQA ASGVAGGDVM  60
DGPCADLEVT SSNHQQEQLL LHADQDHQVV DAIYVAQEGA DPVIQNGADH DDSRQPQYHG  120
GQQQQQQQQL YDYFYYEATG AGSDEAGRKP SGSGVDINVD VMQHFDYDSS CEVDDHHKVD  180
QLEPMISSSL EEHYQIGQKE YEMKVASFVD VLDVRPELQA VDGNADIGIK EELQEEDPKN  240
NDEDIALRKA AHMAESSHCR LGLGF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151955.10.0uncharacterized protein LOC109737153
TrEMBLA0A3B6H6F30.0A0A3B6H6F3_WHEAT; Uncharacterized protein
STRINGEMT038250.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52283461