 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT03764 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 222aa MW: 24513.7 Da PI: 10.236 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT03764 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.4 | 2.9e-19 | 97 | 152 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rrk+ ++tkeq Le F+ ++ +s+ +++eLA++l+L+ rqV vWFqNrRa+ k
EMT03764 97 RRKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLSSRQVEVWFQNRRARTK 152
79999*************************************************98 PP
|
| 2 | HD-ZIP_I/II | 113 | 1.9e-36 | 98 | 186 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+kk+rl+keq +lLE sF++++ L++ +K+elar+L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++e+++L++e eLr+
EMT03764 98 RKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLSSRQVEVWFQNRRARTKLKQTEVDCEFLKRWCESLTHETQQLKHELLELRR 186
69************************************************************************************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MERRDLGAWL GLATGGGAAW HTHDGERRPD PVRLDELFPQ RGKEERDHGE QVARNTGGKG 60
ARRKIKVGGD DEGRSSSSNG PCLSDGGGSD GGGGGGRRKK LRLTKEQCAL LEGSFRAHNI 120
LSHVQKQELA RQLNLSSRQV EVWFQNRRAR TKLKQTEVDC EFLKRWCESL THETQQLKHE 180
LLELRRSAVA PVAAGSKLFA QLPRAAAMMN LCPSCEKVAV NN
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 95 | 102 | GRRKKLRL |
| 2 | 146 | 154 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
