PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03342
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 1041aa    MW: 118254 Da    PI: 7.6276
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03342genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.91.6e-219631023259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY    2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                +Dg+nWrK+GqK++++s+f r YYrC++    +Cpv k+++r++ dp +++++Y+ eH+++
  EMT03342  963 SDGFNWRKFGQKTIHDSKFRRDYYRCAHYrshKCPVIKHMQRTDADPLLFQVVYRHEHTCT 1023
                7**************************97788**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147981.32E-2739168No hitNo description
SuperFamilySSF525401.12E-57190468IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.7E-18224382IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009314.9E-59224496IPR002182NB-ARC
PRINTSPR003641.8E-15228243No hitNo description
PRINTSPR003641.8E-15304318No hitNo description
PRINTSPR003641.8E-15401415No hitNo description
SuperFamilySSF520583.4E-30532911IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.6E-20604898IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003641.8E-15658674No hitNo description
PROSITE profilePS5081118.4529571025IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.8E-219611023IPR003657WRKY domain
SuperFamilySSF1182907.06E-209611024IPR003657WRKY domain
SMARTSM007746.2E-259621024IPR003657WRKY domain
PfamPF031069.7E-209641022IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1041 aa     Download sequence    Send to blast
MWRLMNPWIC SRRRKKKEKG KFNTGSVAGS MEAAVVSVSH GAIGFVIAKL GDLLAGKYKL  60
LKQAKGKIMF LKAELESMPA FLERMSEAEE EPDKQAKCWA NEVRDLSYDI EDSVDEFMLL  120
VEGESNGESH GFKGFIHRSM NLLTTMNTRQ KVAKEFQGLK SRVMEVSERR MRYKIDDAVS  180
KPNNTTIDIR MLALYADTSG LVGIDGLRDE LIHLMVGEEG VSAQQRKVLS IVGFGGLGKT  240
TLANQIYHRL KWQYECQAFV SVSQKPNIRM ILRRMLSQVG YVALEGTNME IWAEDELISA  300
LRQFLMDKRY LIVIDDIWDE TTWNVIRCAL PKNLDGSMII TTTRINTVAR ACCCNQHDYV  360
YKMKSLSNED SRKLFFNRVF GSEEACPLYL EEVSAQILKR CAGLPLAIVT ISSLLASEQN  420
TLKENWVHIK NSLGPNFEVN PTLEGMRQIL SLSYINLPHY LKTCMLYLGM YPEDYIIWKN  480
DLVRQWIAQG FVSKVHGQYP EAIAEGYFNE LVNRGIIQPV DTDHNNEVLS CKVHDMILDL  540
IVHKCRDENF IIATHDIQAM IGLSGKVRRL SLYLDGIIDG TILETAQLSQ VRALARFGTS  600
AYAPPLLKFN HLRVLTLEFT SGNHGSEIPD LTGISHLFHL RYLKIKADGE IVLPRKIRGL  660
EQLETLELGA CPLEVPQDVI HLRRLQHLII PSGINLPDGI GNMKSVCTLQ EFDVGLNSID  720
NIRGLGELTN LRNLRICYYM DELHDRKTTQ RLDVLRCSLE KLCNLRYLHT DSNINSIYAL  780
SSHVSLCLLR RLHMLCMFPM VPKWIGELHN LIDLDLRVEV LEDDIVILAQ LQSLNHLKLH  840
VEGTCEAKEK VVICGIGFPI LKHFRLSCIR ISQLTFEAGA MPSLEKLEVR LNFLYGGAPM  900
GIEYLLGLKE ILVIVGGYGA EGSTTRAAVS ALREAINMRS SRPTADITCV DNSMFFGLLS  960
LSSDGFNWRK FGQKTIHDSK FRRDYYRCAH YRSHKCPVIK HMQRTDADPL LFQVVYRHEH  1020
TCTTQSMFPL PQPGNEEIVD R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C5e-57318581839Disease resistance RPP13-like protein 4
6j5t_F5e-57318581839Disease resistance RPP13-like protein 4
6j5t_G5e-57318581839Disease resistance RPP13-like protein 4
6j5t_L5e-57318581839Disease resistance RPP13-like protein 4
6j5t_O5e-57318581839Disease resistance RPP13-like protein 4
6j5u_A5e-57318581839Disease resistance RPP13-like protein 4
6j5v_A5e-57318581839Disease resistance RPP13-like protein 4
6j5w_A5e-57318581839Disease resistance RPP13-like protein 4
6j6i_C5e-57318581839Disease resistance RPP13-like protein 4
6j6i_F5e-57318581839Disease resistance RPP13-like protein 4
6j6i_G5e-57318581839Disease resistance RPP13-like protein 4
6j6i_L5e-57318581839Disease resistance RPP13-like protein 4
6j6i_O5e-57318581839Disease resistance RPP13-like protein 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11217RRKKKE
21318RKKKEK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193469.10.0putative disease resistance RPP13-like protein 3
TrEMBLN1QTE80.0N1QTE8_AEGTA; Disease resistance protein RPM1
STRINGEMT033420.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-16WRKY family protein