PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03105
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 636aa    MW: 70650.9 Da    PI: 7.2943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03105genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.3e-12455508454
               HHHHHHHHHHHHHHHHHHHHHCTSCCC......TTS-STCHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkas...kapskKlsKaeiLekAveYIksL 54 
               +h + Er+RR ++N++f  Lr+l+P  +   + ++  ++Ka+iL  ++eY+k+L
  EMT03105 455 SHVMQERKRRGKLNERFIILRSLVPFVTktsSFHGYQMDKASILGDTIEYVKQL 508
               899***********************55585556666****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.053451508IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-15452519IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-14454513IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9455508IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-11455513No hitNo description
SMARTSM003531.2E-12457514IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    Send to blast
MEMVPVSGDV QEVLKQVDRK HKGKWGERVS MRKAPHMLDR LPQELSETLK VEDCIRAASM  60
SRNFTKNPLR WRRLNKWSHQ IESRVAKGRQ VALCEVHALP IEIMRPSLAL VQYGPEVLLG  120
QLLSLIMMHH CGAGGRSSSF YGHSHLSASI AFYMLTRGRP RLPGRAFARG GHVWLSRANE  180
VDSRAFSRAI LARSAGIKVE EEIGLVQYAM AIFMDQQEAH MIPSICHSNQ TSHIDQQSFQ  240
THTCQTKQEP NKFDTEYEDD EMEYDDDDEI DAGCASGSAS DDDQATHNAR SSELMQVEMS  300
ERGRDGCSSN LGDEIQMLMV CQNGTSDHSN LHGQDEPWHF LYEELCSGYP QSSGEDQAMA  360
ENAHYAQTVS LILHRNNALR QADGLHTGSY LAISHRSSFS RWDAGIHGRT VAQGAARQKM  420
LKSVLLFFNA TCNKPPGDLR CDEAGARREV DFGASHVMQE RKRRGKLNER FIILRSLVPF  480
VTKTSSFHGY QMDKASILGD TIEYVKQLTK RIQDLESSTV RGPTMSREKR ALLTGMEGPS  540
SSSGSSSSAP VATDVQVSII ESDALLAAPC PAGRGLLVAI MQALQEQLRL EVTSVQASSD  600
HGVLLAEMRA KVREVHGRRS SISQVKRAIH LIISSG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155869.10.0basic helix-loop-helix protein A
TrEMBLR7W1G00.0R7W1G0_AEGTA; Transcription factor TT8
STRINGEMT031050.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88633036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.14e-36bHLH family protein