PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT02999
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 348aa    MW: 37749.4 Da    PI: 8.5972
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT02999genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.6e-12549347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +W++eE++ ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
         EMT02999  5 SWSEEEHKNFLLGLNKLGKGDWRGISRNYVVSRTPTQVASHAQKY 49
                     7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.95154IPR017930Myb domain
SMARTSM007175.5E-9252IPR001005SANT/Myb domain
TIGRFAMsTIGR015576.2E-17453IPR006447Myb domain, plants
SuperFamilySSF466891.87E-14555IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.6E-9548IPR009057Homeodomain-like
PfamPF002492.8E-10549IPR001005SANT/Myb domain
CDDcd001672.09E-8550No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MASESWSEEE HKNFLLGLNK LGKGDWRGIS RNYVVSRTPT QVASHAQKYF IRQTNVNRRK  60
RRSSLFDMVI EDVSISPYLS ISLHVVLRCN QVQLIALRQT CLLRLVLILF LFVPVALPGD  120
QPLSRSSSQE MPLSRSSSQD VEEFVDDLRP VTAPVTPPAP MPVITSVSVP PPVPVMAPPA  180
PVPMLTYASA PSPVLAMAHQ PQGNESAGSS SIAGEAGMVM PQVMPPYGYP PPMMIPAPHY  240
VQAVFPYPYY GYAPMFYGPP VSMQASSPGT VQASHEPVRP VAVHSAPPVN VEDLYNMSKL  300
NLKGDSSTNG VAPNLALPPN PNGRPERQSA FHGKEPENGS SNGLIPTK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519520.0JF951952.1 Triticum carthlicum clone TaMYB69 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020170412.10.0transcription factor MYB1R1-like
TrEMBLR7W0G40.0R7W0G4_AEGTA; Myb-like protein J
STRINGEMT029990.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129002629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.17e-26MYB_related family protein