 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT02832 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
ARR-B |
| Protein Properties |
Length: 595aa MW: 66097.7 Da PI: 5.0533 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT02832 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 81.6 | 8.7e-26 | 202 | 255 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl
EMT02832 202 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 255
68*******************.9*******************************8 PP
|
| 2 | Response_reg | 67.1 | 7.9e-23 | 13 | 132 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTC..........EEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHH CS
Response_reg 1 vlivdDeplvrellrqalekegy..........eevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeed 85
vl+vdD+p+ +++l+++l+k y +v+++ ++ ale+l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge +
EMT02832 13 VLVVDDDPTWLKILEKMLRKCSYedllpiitteWSVTTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSR 108
89*****************6666222455544447899999999*****777777**********************6654.8************** PP
HHHHHHTTESEEEESS--HHHHHH CS
Response_reg 86 alealkaGakdflsKpfdpeelvk 109
+ + ++ Ga d+l Kp+ ++el++
EMT02832 109 VMKGVQHGACDYLLKPVRMKELRN 132
*********************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0010082 | Biological Process | regulation of root meristem growth |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 595 aa
Download sequence Send
to blast |
MADASAFPYG LRVLVVDDDP TWLKILEKML RKCSYEDLLP IITTEWSVTT CGLARVALEI 60
LRERKNRFDI VISDVNMPDM DGFKLLEHIG LEMDLPVIMM SIDGETSRVM KGVQHGACDY 120
LLKPVRMKEL RNIWQHVYRK KMHEVKEIEG HDSCDDLQIL RYGFEGFDEK GLFMTVDSDA 180
TRKRKDVDHG DQDSSDGATA KKARVVWSVD LHQKFVNAVN QIGFDKVGPK KILDLMNVPG 240
LTRENVASHL QKYRLYLGRL QKQNEERILG SARQDFSTKG PSSENLNLRS SFQEQPSNTS 300
SGYPHASQKI QGQSSVSDSQ LEETKRTVPL PAPDRSMNSV SSAAEPQNVA GVSPIGGVLS 360
FKGLPVNQDR KPSETMILEC QAWTGGVPAK QFMQYPKHNH ARCDLLGDYA CLPKPDLEHP 420
TAPGHLFTPP PLISMSCSTE MDARNFSDVK PALLDCIKSF SPALTCTADS VSVQISDSVV 480
TSTDAADRKF SSVEGLPSTK DCYFGQTSNQ GSWLRSQEEP SIICGADFAS LPEDLPGYPL 540
QGGVSFENVG LSSIDLFHYN DAMILSGLQS NWYDDQDHFS SETTDYPLMD GCLFA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
