PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT02809
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 290aa    MW: 31727.9 Da    PI: 10.397
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT02809genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM552.8e-17521821127
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkya....tgkrknr.atksgyWkatgkd 89 
               lppG+ F+Pt+ e +  +L++ ++g++   ++  +i ++d+y+ +P  L++     +++a+e+ w+f  +++ +++    ++kr+ r + + g+W+   ++
  EMT02809  52 LPPGVYFNPTNAESI-GFLNRWIAGDDkmPDARGFIFHADMYDNDPYALQRlhppaSARAGEHTWWFLGESKFQSPcsatKNKRADRsVRTGGFWQVEQSK 151
               79*************.99*****999875566667**************85567766666778888887777666655545667777445589******** PP

       NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
               +e+ +      g k+++ fy   apk  kt W+m+e++
  EMT02809 152 EEIPE-----GGRKNSFGFY--CAPKKPKTPWLMQEFT 182
               ***98.....689*******..788889*********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-1647189IPR003441NAC domain
PROSITE profilePS5100517.90452203IPR003441NAC domain
PfamPF023655.1E-1153182IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MAVTKARKAI KRSRSTSATA DADAGAGASS SMSMAPPPGP GGLSELQQPP PLPPGVYFNP  60
TNAESIGFLN RWIAGDDKMP DARGFIFHAD MYDNDPYALQ RLHPPASARA GEHTWWFLGE  120
SKFQSPCSAT KNKRADRSVR TGGFWQVEQS KEEIPEGGRK NSFGFYCAPK KPKTPWLMQE  180
FTSDRDRGAG RRGVPALHKL YVTPRPEGLR EVYGEDGLTA GNKKPVPADY FAAAAALLPP  240
GSVRGLRQEH VEPHASDRPP SPPPLRLYTR RTCRLRPRPF FTTATTAKAS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010236658.38e-56NAC domain containing protein 52
TrEMBLN1QSF20.0N1QSF2_AEGTA; NAC domain-containing protein 48
STRINGEMT028090.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP135701724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.14e-07NAC domain containing protein 3