 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT02062 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MYB_related |
| Protein Properties |
Length: 268aa MW: 29630.1 Da PI: 6.2599 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT02062 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 109 | 152 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE++l+vd+ ++G++ W++I r+++ gRt++++k++w++
EMT02062 109 RGNITPEEHLLIVDLQGRWGNR-WSKIVRHLP-GRTDNEIKNFWRT 152
7999******************.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MPPCRRLRSE PFLTPESRLE LLEQIRARRD AQIATGLPPD PLHPEEEKVE EDEEDFEEEG 60
DKPKEEDAGT LATRICRRSS RPSSIPGLNR TGKSCRLRWL NYLRPDVRRG NITPEEHLLI 120
VDLQGRWGNR WSKIVRHLPG RTDNEIKNFW RTKIQKKRRA GATASDSAGC QLLSSTAVTE 180
SQSSSSNSVV RPGGMPHYDV VAATTQPGGW GDHQLGYAVQ GGGVAACAGG MDAGVPPEFL 240
QAAAVAADNF WGLEEFWPTV PPSLHGDY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1a5j_A | 1e-14 | 90 | 157 | 40 | 107 | B-MYB |
| 1gv2_A | 1e-14 | 90 | 157 | 37 | 104 | MYB PROTO-ONCOGENE PROTEIN |
| 1h88_C | 4e-14 | 90 | 157 | 91 | 158 | MYB PROTO-ONCOGENE PROTEIN |
| 1h89_C | 4e-14 | 90 | 157 | 91 | 158 | MYB PROTO-ONCOGENE PROTEIN |
| 1h8a_C | 2e-14 | 90 | 157 | 60 | 127 | MYB TRANSFORMING PROTEIN |
| 1mse_C | 1e-14 | 90 | 157 | 37 | 104 | C-Myb DNA-Binding Domain |
| 1msf_C | 1e-14 | 90 | 157 | 37 | 104 | C-Myb DNA-Binding Domain |
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