PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01908
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 271aa    MW: 29510.3 Da    PI: 8.4477
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01908genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.61e-182715213128
       NAM  13 elvveyLkkkvegkk..leleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkgelvgl 102
               elv++yL+++++g++    ++++++e+d+y ++P +L +       ++++e+k+wyfFs  + k+a+++rk+r++   +g+Wk+    ++v++ +g++vg 
  EMT01908  27 ELVSFYLRPRISGQPlpDATSQFFHEADVYATDPASLVSgrlpgpaRAQGESKNWYFFSLVKPKSAQNSRKSRIVGggKGTWKQERG-NDVVDGEGHAVGR 126
               9**************64333456**************6446788877788899********************76656899**8766.56777799***** PP

       NAM 103 kktLvfykgrapkgektdWvmheyrl 128
                + +++  + +++ +  +W+m e+++
  EMT01908 127 FEKFTYTPNPKEDKKPPEWLMMEFSV 152
               *******9988888999*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.76515172IPR003441NAC domain
SuperFamilySSF1019411.44E-2324172IPR003441NAC domain
PfamPF023652.0E-926151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MASPPLPGSS SFYSSEDEPA FFLNPCELVS FYLRPRISGQ PLPDATSQFF HEADVYATDP  60
ASLVSGRLPG PARAQGESKN WYFFSLVKPK SAQNSRKSRI VGGGKGTWKQ ERGNDVVDGE  120
GHAVGRFEKF TYTPNPKEDK KPPEWLMMEF SVGQEDGGQP GPVLCLCKIY QSPRFLKSAS  180
KNSASARKRK TPDDGPRLSP PSLHASAPKK SKAPMDESPA ARRQLLFPSL PPPSNLPSPV  240
LFASPPPSAP NPVVELEDDF LANILADPEM N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158907.11e-155NAC domain-containing protein 55-like
TrEMBLN1QRT10.0N1QRT1_AEGTA; NAC domain-containing protein 78
STRINGEMT019080.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16781612
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-12NAC domain containing protein 2