 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT01676 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 225aa MW: 25536.5 Da PI: 5.7205 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT01676 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.6 | 2.2e-18 | 40 | 93 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ft+eq++ Le+ F+ ++ +e++eLA++lgL+ rqV +WFqN+Ra+++
EMT01676 40 KRRFTEEQVRSLESTFHTrRAKLEPREKAELARQLGLQPRQVAIWFQNKRARWR 93
458**************8899********************************9 PP
|
| 2 | HD-ZIP_I/II | 119.2 | 2.3e-38 | 38 | 131 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
e+krr+++eqv++LE++F++++ kLep++K+elar+Lglqprqva+WFqn+RAR+++kqlE+d++ L+ +ydal+++ e+L++e+ +L+++l+e
EMT01676 38 ERKRRFTEEQVRSLESTFHTRRaKLEPREKAELARQLGLQPRQVAIWFQNKRARWRSKQLEQDFAELRGHYDALRARVESLKQEKLTLAAQLEE 131
69*****************9999*******************************************************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MESDCQFLLA PPPRMYAAAG DDGQFLQQHQ LNGGGAGERK RRFTEEQVRS LESTFHTRRA 60
KLEPREKAEL ARQLGLQPRQ VAIWFQNKRA RWRSKQLEQD FAELRGHYDA LRARVESLKQ 120
EKLTLAAQLE ELKKKLNERQ DQSASCGGSC AVADVDDKRN NVSSCVMKAK DESVAPATDV 180
SDGSTPGWYE YDDHLAYGVD LHEPFCATPE LWETSWPLVE WNAVA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT224375 | 0.0 | KT224375.1 Triticum aestivum cultivar RAC875 HDZipI-4 mRNA, complete cds. |
