PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01329
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 567aa    MW: 60923.9 Da    PI: 4.7071
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01329genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00016384223
              EETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
              kC +C++ F ++  L+rH r+H
  EMT01329 63 KCAKCPREFCSSVALRRHTRVH 84
              7*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.0146284IPR007087Zinc finger, C2H2
PROSITE patternPS0002806484IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MAASGSGSVS GQIQPLKIPD AVVALAQAAS KANNSSNSAA ADATDKYLPG WPLFSPPKMQ  60
LTKCAKCPRE FCSSVALRRH TRVHRRALKI DKDFPKNRDH LAAFWDKLTV DQAQAILSLE  120
GVAIEETSAL FILTSLSSWM CKPGYASLPL PYARAGNELL DLIQTAASRL PISSNELFIM  180
LDEASENTFL CTNAADAACV QKFLFDGEVD KVATELKNVV ACTSYILEQK LVEAWSADKA  240
AEALRCQKLL VEEEDAAQKR QAEIIERKRM KKLRQKEQRL KDLKDEGTTV QLPEAVDGAT  300
SSPGIQSLEA TSGPGLHEQE DSQYLQLSAP VPSEDNDYNG EDANCGSGQE MDTGAVFREQ  360
AMATSNLDRI ENLPPNSTVS GSSATASKHP SSSSVRHSRH REPNAGAATN KSKTWAWKVR  420
TGVEERCPKG EPDVDANQET APLNTDKNLQ VLIGSISVAI EGGGSCSEDS KDYHPAPPES  480
DLNTLNDPVA EAMQPISHDE NGCEDANAAE DHSPSSVVTD ESGCDAEAAE GGSLRRGSVS  540
SGQEAAAFLS QRWKEVMAGD HVKLVLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1265272ERKRMKKL
2270280KKLRQKEQRLK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3559140.0AK355914.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1027M18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160651.10.0uncharacterized protein LOC109745950
TrEMBLA0A453GZF80.0A0A453GZF8_AEGTS; Uncharacterized protein
TrEMBLR7VZ590.0R7VZ59_AEGTA; Uncharacterized protein
STRINGEMT013290.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP85032430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.19e-83C2H2-like zinc finger protein