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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT01310 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
HD-ZIP |
Protein Properties |
Length: 219aa MW: 24188.6 Da PI: 10.6089 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT01310 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 37.2 | 4.9e-12 | 130 | 157 | 29 | 56 |
HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 29 ereeLAkklgLterqVkvWFqNrRakek 56
e+++LA +lgL+ rqV vWFqNrRa+ k
EMT01310 130 EKRDLAGQLGLKPRQVEVWFQNRRARTK 157
7889**********************98 PP
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2 | HD-ZIP_I/II | 92.5 | 4.6e-30 | 89 | 191 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeper..............KvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84
+kk+rl++eq++lLE+sF++++ L++ r K +la +Lgl+prqv+vWFqnrRARtk+kq+E d+e L+r++++l+++n+rL++e
EMT01310 89 RKKLRLTAEQAALLEKSFRAHNVLSHVRpclllnlslkckveKRDLAGQLGLKPRQVEVWFQNRRARTKLKQTELDCELLRRWCERLSDDNARLRSEL 186
69*******************998764333333333333333899****************************************************9 PP
HD-ZIP_I/II 85 eeLre 89
+e r+
EMT01310 187 AETRA 191
98775 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MSSLTTISSA SKESLEVEEL VDTRLSLVIG TGSQPPPVQA PLLRPEARER GEKRIGSSAR 60 QHGKRARAVH SGSDVDDDDN GGDAAGRARK KLRLTAEQAA LLEKSFRAHN VLSHVRPCLL 120 LNLSLKCKVE KRDLAGQLGL KPRQVEVWFQ NRRARTKLKQ TELDCELLRR WCERLSDDNA 180 RLRSELAETR AVLLVGGSHD SRLMGCPSCN RLAGGRRAA
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 86 | 92 | RARKKLR |
2 | 151 | 159 | RRARTKLKQ |