PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01196
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 435aa    MW: 45912.2 Da    PI: 7.3069
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01196genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-053203571254
               HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               R +++ +++  L++l+ +      +K + a++L +++eYIk L
  EMT01196 320 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 357
               677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.017308357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.62E-5318361No hitNo description
SuperFamilySSF474593.53E-11318376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-8318366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MGDHQLMHAA PAMYNGGGAG AVSHGMWGNS NARGAVPAAA CSTELAGFNT WPAGLAAGGY  60
DVGADGGKQA KSCTTTASSE SPGNNSSLTF QETASINDPA AAGFTDWNNP YMSSGAGNMH  120
GFLQVGHHDM SSRTDQQSMM NAVAAPNNLD LALQGHHHHQ QQQQDDHHRQ QQLLSSLGAP  180
ELLLSPNSPY GFQSSLLRSL IEPTGKPAPA AGLLQQYQYQ QMGGQTGARE PLQFTNDAAF  240
WNQSAGFGMG MAAPPATDNT SVRAVKQPSP APRGANLALK TVLEGVGDSS SIVAKKASGE  300
PAFKKPRMET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK TDTASVLHET IEYIKFLHDQ  360
VGVLSAPYLK SGHHQHQVPQ YLKSSSNGSP DKSCKDGGEV SLKGRGLCLV PISSTFAVAS  420
DVPVDFWNPF GPQFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3643030.0AK364303.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2023J11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168093.10.0transcription factor bHLH112-like
TrEMBLN1QQA30.0N1QQA3_AEGTA; Transcription factor bHLH112
STRINGEMT011960.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.12e-45bHLH family protein