 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT01027 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
WOX |
| Protein Properties |
Length: 408aa MW: 43127.7 Da PI: 8.5783 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT01027 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 49.3 | 8.2e-16 | 53 | 112 | 2 | 56 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
++R+++ +eq+++Le F++ +p ++e++++ +l ++ +++V++WFqNr+ + k
EMT01027 53 KPRWNPRPEQIRILEGIFNSgVVNPPRDEIRRIRLRLqeygHVADANVFYWFQNRKSRTK 112
89*****************99*************************************99 PP
|
| 2 | Wus_type_Homeobox | 105.9 | 2.5e-34 | 52 | 114 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+++RW+P+peQi+iLe +++sG+++P+++ei+ri+ +L+eyG++ d+NVfyWFQNrk+R ++k
EMT01027 52 TKPRWNPRPEQIRILEGIFNSGVVNPPRDEIRRIRLRLQEYGHVADANVFYWFQNRKSRTKNK 114
689**********************************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0010075 | Biological Process | regulation of meristem growth |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MASSNKHWPS MFRSNPAACD FHHQPDMSNT HTRPSLISSG LDQETTRSPG ETKPRWNPRP 60
EQIRILEGIF NSGVVNPPRD EIRRIRLRLQ EYGHVADANV FYWFQNRKSR TKNKLRAAAA 120
AAAAQGQQPT GGRAAVMRAS LAVRTPALAP VTPPRRFLAP CGTLQAPTSS SSSSSDRSSG 180
SSRSVTMKTT AMASSAVASL SQPMLPLSTA AIDLFAPAPP PLTPSPGLSA CQLYYQLQNH 240
PMTSMPTPTP VRELVTSTPE PAPLLPQWPP QSQCQYLPAT ELGGFLGSHG HTHPTAVSPG 300
ALLLSGLCTD SVLGQHEIVD DMSCSKLGLG VGGPYHFNVP ADPPSDAVSA VIKDDEKARL 360
GFLHHYGLGA TAGADVSATA LPCTPPIGNA AASSAFTDQL QGTLPCQG
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AM490242 | 1e-73 | AM490242.1 Zea mays mRNA for putative wuschel homeobox protein (wox9C gene). |
