PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT00528 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 97aa MW: 11142.8 Da PI: 10.7879 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.2 | 6.5e-17 | 12 | 65 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e+ r++r+++NRe+A rsR+RK+a++eeLe++v L N +Lkk+ +e++ + EMT00528 12 EDPRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLKLKKQCKEINLSC 65 6789************************************99999999887655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.4E-11 | 10 | 74 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.5E-15 | 11 | 62 | No hit | No description |
PROSITE profile | PS50217 | 10.151 | 12 | 62 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.06E-12 | 15 | 62 | No hit | No description |
Pfam | PF00170 | 4.7E-13 | 15 | 62 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.72E-14 | 18 | 65 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MELRQGGGSS GEDPRTIRMM RNRESALRSR ARKRAYVEEL EKEVRRLVDD NLKLKKQCKE 60 INLSCHFSLV LCWDKVSSVS KTATTISTRG NAQMVRT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK249012 | 2e-56 | AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177215.1 | 4e-35 | protein FD-like | ||||
TrEMBL | N1QP79 | 3e-64 | N1QP79_AEGTA; BZIP transcription factor TRAB1 | ||||
STRING | EMT00528 | 4e-65 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |