PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0418s00014.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

ERF

Protein Properties

Length: 692aa MW: 68493.3 Da PI: 5.7123

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0418s00014.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22.2	3.6e-07	12	37	30	55
AP2 30 rfslgkfgtaeeAakaaiaarkkleg 55 r +lg+f+ta eAa+a++ a+++++g Dusal.0418s00014.1.p 12 RRWLGTFDTAIEAAQAYDDAARQIRG 37 56*********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	11.219	1	45	IPR001471	AP2/ERF domain
SMART	SM00380	6.3E-5	7	51	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	4.12E-9	8	45	IPR016177	DNA-binding domain
CDD	cd00018	1.35E-11	12	45	No hit	No description
Gene3D	G3DSA:3.30.730.10	1.9E-13	12	45	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence Send to blast
MVCYEISYGT LRRWLGTFDT AIEAAQAYDD AARQIRGPQA RCNFALPGEI GYELPDPAGG 60 VPLPGIHTST SHVKGNHHFG GHGGARKRGS FNHGAHKASM NAQVAGGFGQ QKHASLHASS 120 GQQQLQPDQR ISTGMPCLPL GMQLGAEEAE EAAGGNDEPL ITASSNGLGA ADIHGIMSIQ 180 EALLLPSCML NGTSPPAVAH KVPKTCGTSP PSSPAYATSH APSTQDDSTQ APPSTSSVAT 240 EEKARTASAA VHSSESSANS NGTTEGAHNS SALSGLRPGE EGRRCAAASS GAEGNHSAGG 300 ATGAGGGVSG CPDNAGEVRV SQHKGAGITG NKRNAPSPCL LPEWPPVGSF GSLGKSAGME 360 GEGGSLMGAS PGLLGGRAMG SSSPFGTSVD MVDVCVQLMH GGTGGDALGN LGSLRNELND 420 LPFSFTSRGE CGIPEGIATV GSPAAPTAEG LAAIASAAAP AAAEGFHAAD GRFTAAAEGF 480 SAAEGFAAIA SAAAPAAAAK GTEGTAGGSS GGGAALATAA PAHAGASTGV TLSAAATQQP 540 LHQQPQPDTP RLGGGSSRGS VFANVNSSAT KPVQLREQLQ QQQQGHTKDG GGSDDIDDIM 600 GMSPDQPTTT GSSGFEGYML QMQQQQQQQQ QLLLLAQQQA HLLPTAAPSW TANSTSGGGV 660 MAGMMAAAAC GAGAAGVQPA FAAWPGSTWP E*

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence Send to blast

MVCYEISYGT LRRWLGTFDT AIEAAQAYDD AARQIRGPQA RCNFALPGEI GYELPDPAGG  60
VPLPGIHTST SHVKGNHHFG GHGGARKRGS FNHGAHKASM NAQVAGGFGQ QKHASLHASS  120
GQQQLQPDQR ISTGMPCLPL GMQLGAEEAE EAAGGNDEPL ITASSNGLGA ADIHGIMSIQ  180
EALLLPSCML NGTSPPAVAH KVPKTCGTSP PSSPAYATSH APSTQDDSTQ APPSTSSVAT  240
EEKARTASAA VHSSESSANS NGTTEGAHNS SALSGLRPGE EGRRCAAASS GAEGNHSAGG  300
ATGAGGGVSG CPDNAGEVRV SQHKGAGITG NKRNAPSPCL LPEWPPVGSF GSLGKSAGME  360
GEGGSLMGAS PGLLGGRAMG SSSPFGTSVD MVDVCVQLMH GGTGGDALGN LGSLRNELND  420
LPFSFTSRGE CGIPEGIATV GSPAAPTAEG LAAIASAAAP AAAEGFHAAD GRFTAAAEGF  480
SAAEGFAAIA SAAAPAAAAK GTEGTAGGSS GGGAALATAA PAHAGASTGV TLSAAATQQP  540
LHQQPQPDTP RLGGGSSRGS VFANVNSSAT KPVQLREQLQ QQQQGHTKDG GGSDDIDDIM  600
GMSPDQPTTT GSSGFEGYML QMQQQQQQQQ QLLLLAQQQA HLLPTAAPSW TANSTSGGGV  660
MAGMMAAAAC GAGAAGVQPA FAAWPGSTWP E*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP132	15	40

Link Out ? help Back to Top
Phytozome	Dusal.0418s00014.1.p