PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0405s00001.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family ERF
Protein Properties Length: 645aa    MW: 69584.2 Da    PI: 4.9133
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0405s00001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.21e-0895146155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           s+++GV+w+ ++ +W ++Ir p  ng +   ++g f  ++ Aa a++aa+ +l+g
  Dusal.0405s00001.1.p  95 SRHRGVSWNVQSSKWQVHIRPP--NG-QNPMRIGDFADEDAAASAYDAAAWRLRG 146
                           789******************8..44.69*********99**********99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.941460IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-7561IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-61461IPR001471AP2/ERF domain
SMARTSM003800.00111566IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1295155IPR016177DNA-binding domain
SMARTSM003801.3E-696160IPR001471AP2/ERF domain
PROSITE profilePS5103214.73796154IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-1297155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    Send to blast
MSSGFKYVHC PRGGKWRGIV TGPNGENYHT NCFDSPEDAA RAVDQLIYKV RGPDALTNFP  60
LAEQRARLDS ITLEQLLAEF RAAGAAGRIF SSGRSRHRGV SWNVQSSKWQ VHIRPPNGQN  120
PMRIGDFADE DAAASAYDAA AWRLRGSDAK LNFPSKYMGL TPGQEPPAIE TEIPDQSARD  180
RLEAAASGSK GSASRGQKKR KPPLNNPVPR KKASVGAGTS SNVTSLDSHA SDISTEDGDD  240
DGFDSDSSEG GDGSSSEDLA DSCHNSPPLA WLEDSAPDEG LQPGGQSDQE RAINPIIFNS  300
ILQQLPLPND YSCVSGMEIA EQVEISPAVN LAKPPQATEG LGMAATSAQK DKIAAGFGTV  360
SKSNSPLPVA SGNEADGQQQ GEKEHSKEER EGGYACGAGM QHSSAPLEGL CEARPLEEGQ  420
LEAAQEAERF LRESLDPLGT SCAHASKAPT DACSTGTRFS DMPEHPNTSN RPQPFTDTIF  480
PRSSDGAFHM AIADMQLRRM FLELGMLDEH GRMPDEDRPT HMLALRKELA AKSAAQAKVF  540
EDLPPLYSAE GHLLQSLAHV RHQKDEELAE LLLAQLALAE RGMPLTIKPQ DYIWVLDPEP  600
GPGPLRPKGS PASNDHPAYV LHYLHQMSVP LEEEQVCKLE KWHF*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1050944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.16e-10AINTEGUMENTA-like 5