PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0251s00011.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family GATA
Protein Properties Length: 610aa    MW: 64609.2 Da    PI: 6.5817
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0251s00011.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA43.15.9e-14245276134
                  GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                           C+nC+tt+TplWR++  g    CnaCG+y++ +g
  Dusal.0251s00011.1.p 245 CTNCRTTHTPLWRKEA-GML-MCNACGIYFKNHG 276
                           *************888.666.7**********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011416.567239279IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.7E-12239288No hitNo description
SMARTSM004014.0E-12239288IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.104.0E-15241285IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.03E-13244279No hitNo description
PfamPF003203.1E-11245276IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    Send to blast
MLQEPPKLVA FGSLLPHSAL MAEDFSSLVS GERALVFAVA LCGKDFCAIA ETTGKKVPDV  60
EHWYATRFKG SKAYHTLRAG VDIAQRRRDT LIKLFNTLLA PQPGGQPPRF QSQTEALRAQ  120
FLVGDLPADK LLPLLCQVHG TEAVVAAADL RILLGDEAEE IPPPVTPEQT PHVPPAVPVL  180
TPPSLPSATT TATNSPEDHV YMHLHPSVAQ KGGGGSRRGS RASTPQRQTR TAQPEGDGGH  240
SPKVCTNCRT THTPLWRKEA GMLMCNACGI YFKNHGYHRR RSSNAGSVAT ANTTPSQVLD  300
LSALTLNQAN LQQLAHQPGA PASVHAPSSK GGYSSREQPP SMSGSHNSGS ELDPTKFTLV  360
YRTFVTSAVY LHREQPPSVP SSHYSGSELD PTKFTLVYQT FVTNAVYLHR EQPPSVPGSH  420
YSGSELDPNE CDQQFSDAPH VDRPSPLSGL RKPGSQGFAF ANQEPRSDDE DQFPSLPRPR  480
HEDMDPTAPT PRLPSGPVSP RLLEAAAAAK AANAATAAAA AAAEAAASAS QARIPLDATH  540
TFTSRACARI PACSPRLLEA AAAAEAAAMS SQPPIPQPPQ SDSSQAGAAD SMGDELEEDL  600
TVADDASQV*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4830810