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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Dusal.0228s00018.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family |
HSF |
Protein Properties |
Length: 229aa MW: 25156.4 Da PI: 8.9626 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Dusal.0228s00018.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 107.4 | 1.1e-33 | 25 | 116 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgk 90
Fl+k+ye+++d+++++++ w + + sfvv+++ efa+++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+
Dusal.0228s00018.1.p 25 FLTKTYELVDDPSTNSVVPWGSGNASFVVWKPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVNPDS---------WEFANDHFIRGR 104
9****************************************************************998.........************ PP
XXXXXXXXXXXX CS
HSF_DNA-bind 91 kellekikrkks 102
++ll+ i+r+k
Dusal.0228s00018.1.p 105 RDLLRXIHRRKP 116
*********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MTNRHNGHYY QDGPSGVAGG GVPPFLTKTY ELVDDPSTNS VVPWGSGNAS FVVWKPPEFA 60 RDLLPKHFKH NNFSSFVRQL NTYGFRKVNP DSWEFANDHF IRGRRDLLRX IHRRKPASTG 120 GAHAGSIPPP TMMPPGQTAI EEGGKALFSS SPPTPPHLWY EALQMQSLFD LHALIYMPFL 180 RLAPTNLWHK PSICSLYLTL LMVLQGTAEA SSSPPPPVAG IPEDAALV*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5d5u_B | 8e-25 | 13 | 114 | 17 | 129 | Heat shock factor protein 1 |
5d5v_B | 8e-25 | 13 | 114 | 17 | 129 | Heat shock factor protein 1 |
5d5v_D | 8e-25 | 13 | 114 | 17 | 129 | Heat shock factor protein 1 |