PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0077s00023.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family ERF
Protein Properties Length: 269aa    MW: 30653.9 Da    PI: 10.4657
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0077s00023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2301.3e-09184228150
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                           s+++GV++   ++rW+A+ r    ng  k  slg f+ +++Aa+a+++++
  Dusal.0077s00023.1.p 184 SKFRGVHQTFPTKRWEAQFRR---NG--KPTSLGCFDREDQAAEAYDKMM 228
                           79****************555...54..**********99*******987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.77E-8184230IPR016177DNA-binding domain
PfamPF008472.2E-5184229IPR001471AP2/ERF domain
PROSITE profilePS5103210.441185247IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-6185230IPR001471AP2/ERF domain
SMARTSM003800.0075185253IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MPSPLEFHKE KLRQLALSIQ PSICRHKDAD LILLQHFGIT VHDWQDILNP RRLVSRQTPQ  60
LPPPAFPTTN SILWPQPMPL AHPQALRQPE MCLLPPHTAM IAPHLQQQPL HHPQPPTHPQ  120
LQAAPPPPQQ QQQQQRQQKR GQQQQQAQQQ QTQQTHQQAP QQPVPKLNRA VKGKSNGAGR  180
TYTSKFRGVH QTFPTKRWEA QFRRNGKPTS LGCFDREDQA AEAYDKMMLW CELHNTAGVK  240
GGITNYDASK YEEIIPWLRT IAQVSAQP*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002956385.11e-49hypothetical protein VOLCADRAFT_97414
TrEMBLA0A1P8A7628e-77A0A1P8A762_9CHLO; Wrinkled 1
STRINGXP_002956385.16e-49(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP27461414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67180.13e-06target of early activation tagged (EAT) 3