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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do030049.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
GRAS |
Protein Properties |
Length: 375aa MW: 40521 Da PI: 6.5665 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do030049.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 225.6 | 2.3e-69 | 46 | 375 | 1 | 262 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l++lL++cA v++g + +a+ +L+++ +las d+ ++qRlaa+f+ ALa++l++ v++l++al ++++s + aa++ ++++ P++k+s+lt+
Do030049.1 46 LINLLYQCAAEVAAGAFDRANYYLEQITQLASLDApHTLQRLAAVFADALARKLLNLVPGLSRALLSTANS-AEAHLIPAARRHLFDMLPFMKLSYLTT 143
6799*******************************99**************************99777776.345555578888*************** PP
GRAS 99 NqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL. 194
N+aIlea+ege+ vH++D++ + + +QW+aL++a+ +R++gpp+lR+T+v++ ske l +++ Lak Ae++++pf+f++ v+ rl+dl++++L
Do030049.1 144 NHAILEAMEGEKFVHVVDLSgpAANTVQWIALFHAFRARRGGPPHLRVTAVHD----SKEFLANMAGVLAKEAEAFDIPFQFSA-VEARLDDLDPDALr 237
*******************9667899***************************....9**************************.799*******9996 PP
GRAS 195 ...rvkpgEalaVnlvlqlhrll...................................................................desvslese 223
rv++gEala+++v qlhrll +++ + + +
Do030049.1 238 hvlRVRSGEALAISVVGQLHRLLaaddagrrhvpgstcltplqiiarsspssfgellerelntrlqlspgdsssvvsslspqspvlqasqAQQRPAAAK 336
6667888********************************************************************************999666666667 PP
GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
++L++ + lsPk++vv+e ea+hn+++Flerf eal+
Do030049.1 337 LGSFLQAARALSPKIMVVAEPEANHNAATFLERFDEALN 375
9***********************************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MDIFPEDTVS SATSSPGSSL YSPSPHPHGY GAWVQELSHD QQGVRLINLL YQCAAEVAAG 60 AFDRANYYLE QITQLASLDA PHTLQRLAAV FADALARKLL NLVPGLSRAL LSTANSAEAH 120 LIPAARRHLF DMLPFMKLSY LTTNHAILEA MEGEKFVHVV DLSGPAANTV QWIALFHAFR 180 ARRGGPPHLR VTAVHDSKEF LANMAGVLAK EAEAFDIPFQ FSAVEARLDD LDPDALRHVL 240 RVRSGEALAI SVVGQLHRLL AADDAGRRHV PGSTCLTPLQ IIARSSPSSF GELLERELNT 300 RLQLSPGDSS SVVSSLSPQS PVLQASQAQQ RPAAAKLGSF LQAARALSPK IMVVAEPEAN 360 HNAATFLERF DEALN
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