 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Do029136.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
TCP |
| Protein Properties |
Length: 70aa MW: 7341.45 Da PI: 5.6494 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do029136.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 75.9 | 1.2e-23 | 1 | 57 | 24 | 79 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesss 79
++a+c ++F+L +eLG+++d++ti+WLlqqa+pai ++tgt++++a+++ a+s +
Do029136.1 1 MPALCVVQVFQLMRELGHKTDGETIDWLLQQAEPAIVAATGTGTIPANFSsLAVSLR 57
9**********************************************8885444444 PP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3'. {ECO:0000269|PubMed:12000681}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT063432 | 2e-62 | BT063432.1 Zea mays full-length cDNA clone ZM_BFc0063A06 mRNA, complete cds. |
| GenBank | KJ726897 | 2e-62 | KJ726897.1 Zea mays clone pUT3442 TCP transcription factor (TCP2) mRNA, partial cds. |
