 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do028794.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
C2H2 |
| Protein Properties |
Length: 145aa MW: 15561.5 Da PI: 8.2531 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do028794.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.6 | 2.2e-05 | 30 | 52 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C++ F ++ L H++ H
Do028794.1 30 FVCTYCDRKFYTSQALGGHQNAH 52
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 145 aa
Download sequence Send
to blast |
MERLEQELDL ELTLLHPGAL AAREEPPGFF VCTYCDRKFY TSQALGGHQN AHKYERNLAK 60
RRREIAAAMR LHGRSVAAPG ARVDPDGSPA GSAGVIDLLS AGAEPGRARM NIQKSVPSAG 120
QSGSLVHNIS SSSERAGELD LSLRL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU963282 | 9e-51 | EU963282.1 Zea mays clone 260368 hypothetical protein mRNA, complete cds. |
| GenBank | EU973130 | 9e-51 | EU973130.1 Zea mays clone 393764 zinc finger protein 3 mRNA, complete cds. |
