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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do027207.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
ERF |
Protein Properties |
Length: 232aa MW: 24366.3 Da PI: 4.4607 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do027207.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 40 | 87 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++aa++
Do027207.1 40 PSYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDAAALV 87
57*****998.**********843...6*********************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MTDGGEVSSP ASSGGTPPQS PAEAEPRRGE KRARDGGKHP SYRGVRMRAW GKWVSEIREP 60 RKKSRIWLGT FPTPEMAARA HDAAALVVKG PAAVLNFPEM ATALPRPASA APQDVQAAAA 120 RAAAMEPPPM PVPPGAPVAA LPTSSPAPVA GQQQDDDLEA IVELPLLDDD PAELVTLGTM 180 SFAAQASWCD PEWIDDAGAG YMAAAHDDEL FGLWPDGDHG WAQSVGALLW NL
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726940 | 1e-87 | KJ726940.1 Zea mays clone pUT3486 AP2-EREBP transcription factor (EREB144) mRNA, partial cds. |
GenBank | KJ727667 | 1e-87 | KJ727667.1 Zea mays clone pUT5594 AP2-EREBP transcription factor (EREB191) gene, partial cds. |