 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do026796.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
C2H2 |
| Protein Properties |
Length: 185aa MW: 19433.6 Da PI: 8.1182 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do026796.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14 | 0.00015 | 54 | 76 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C++C+++F ++ L H++ H
Do026796.1 54 FACNYCHRRFYSSQALGGHQNAH 76
78******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MANEPAASRA NGVSLDLRLD DLSPRRRRSS AAVAAATAPG PAVVDDRRPP GEAFACNYCH 60
RRFYSSQALG GHQNAHKLER TLAKRSRDIL PAPPSPPSPA SVVFNAAPEG NNRDVDFLLP 120
TTYGAARALA AEDDATAPPR VAMDMARWGA DTATADAGCG RLGLGHGHGH GHGRNGEEID 180
LSLKL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT086880 | 7e-52 | BT086880.2 Zea mays full-length cDNA clone ZM_BFb0022A09 mRNA, complete cds. |
| GenBank | BT086917 | 7e-52 | BT086917.2 Zea mays full-length cDNA clone ZM_BFb0119B18 mRNA, complete cds. |
| GenBank | BT087160 | 7e-52 | BT087160.2 Zea mays full-length cDNA clone ZM_BFb0177L16 mRNA, complete cds. |
| GenBank | EU960522 | 7e-52 | EU960522.1 Zea mays clone 225835 zinc finger protein 2 mRNA, complete cds. |
