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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do026686.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
Trihelix |
Protein Properties |
Length: 409aa MW: 43069.8 Da PI: 6.4623 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do026686.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 42.1 | 2.3e-13 | 76 | 157 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +++ + ++++fd+l+
Do026686.1 76 WSEGATSALIDAWGERFVALGRGSLRHPQWQEVADAVsSSDGYSKapkSDVQCKNRIDTLKKKYKIERAKPAS-------SWQFFDRLD 157
*************************************86677766222667**************99998886.......499999986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MDDDDDLSPD ASPSPASSAG ADPVTLPVAD PVTVASAPPG GGAYPVALPI HRTAASLYAT 60 AGGGGGGGGG GREDAWSEGA TSALIDAWGE RFVALGRGSL RHPQWQEVAD AVSSSDGYSK 120 APKSDVQCKN RIDTLKKKYK IERAKPASSW QFFDRLDFLL APTYGNKPGS GGGGGGGGGH 180 NSNNSRSPVP AALRVGFPQR SRTPLMHAAA AAAKRRAPSP EPSVSSESSD GFPPVPALPA 240 VNGKKRRTDE GRANGGSGGD RTQGLRDLAQ AIRRLGEAYE RVEAAKLEQA AEMERRRIDF 300 ARDLESQRGQ FFLNTQMELT QAKNHASPAG ATTVGGSSRR MSMAADAGGS SNHHHSRYQI 360 SHGDRHHHAL RPHYQQYHEN NHAAAAAAAS DGEQSEEEDN EEEEEEESQ
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G14180.1 | 6e-34 | sequence-specific DNA binding transcription factors |