 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do026022.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
Family |
bHLH |
Protein Properties |
Length: 335aa MW: 35997.3 Da PI: 6.104 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do026022.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.5 | 2.8e-14 | 112 | 163 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++Y+++L+
Do026022.1 112 QRMTHIAVERNRRRQMNEYLAVLRSLMPPS---YAHRGDQASIVGGAINYVRELE 163
79****************************...9******************995 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MPLEAVVFSQ AAGHFGYGRG DSPYAMPWCD LGGGFGDLCA AGDYWDPELD AWAAPAIVGD 60 DWEAASRNDQ SSDASTDQQQ GKKAAPEPAA AAVRRKRRRT KVVKNKEEIE TQRMTHIAVE 120 RNRRRQMNEY LAVLRSLMPP SYAHRGDQAS IVGGAINYVR ELEQLLQSLE AQKSIKNRAA 180 GSMDAAGSSS PFAGFFSFPQ YSTTSAHGCC SSTSLVSSSS NTTNATTNSD ASGGSAESGR 240 PAAVADIEVT MVEGHASLKV LARRRPKQLL KLVAGLHQLC IPPLHLNMTS VDAMVLYTFS 300 LKVEDDSKMG SVEDIATAVH EILGSIQQQE ETAVM
|
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 94 | 98 | RKRRR |
2 | 94 | 99 | RKRRRT |
3 | 112 | 123 | RMTHIAVERNRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT042030 | 1e-112 | BT042030.1 Zea mays full-length cDNA clone ZM_BFb0114I01 mRNA, complete cds. |