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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do024826.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
bHLH |
| Protein Properties |
Length: 262aa MW: 28616.8 Da PI: 5.9119 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do024826.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 33.6 | 7.2e-11 | 101 | 148 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ rE+ RRd++N++f eL +l + + +K++K++iL A++ + +L
Do024826.1 101 TKACREKIRRDKLNERFLELGAILEPG---KTPKMDKSAILNDAIRVVGEL 148
7789**********************9...9**************987665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MASPEGTTWV FDCPLMDDLA VAADFAPAPA GGFFWSAAPP MQPLAVQAVA AASAPIPCFN 60
FCSVEISGSA DCDQGKEQPT NKRFVSLFFF PRSEGTAQPS TKACREKIRR DKLNERFLEL 120
GAILEPGKTP KMDKSAILND AIRVVGELRS ESQKLKDSNE SLQEKIKELK AEKNELRDEK 180
QRLKAEKESL EQQIKFLNSR PSLVPHPPMI PASAFAAPQG PAAAGHKLMM PVISYPGFPM 240
WQFMPPSDVD TSNDPKSCPP VA
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HQ858665 | 1e-168 | HQ858665.1 Zea mays clone UT604 bHLH transcription factor mRNA, complete cds. |
| Publications
? help Back to Top |
- Li X,Zhang H,Ai Q,Liang G,Yu D
Two bHLH Transcription Factors, bHLH34 and bHLH104, Regulate Iron Homeostasis in Arabidopsis thaliana.
Plant Physiol., 2016. 170(4): p. 2478-93
[PMID:26921305] - Aparicio F,Pallás V
The coat protein of Alfalfa mosaic virus interacts and interferes with the transcriptional activity of the bHLH transcription factor ILR3 promoting salicylic acid-dependent defence signalling response.
Mol. Plant Pathol., 2017. 18(2): p. 173-186
[PMID:26929142] - Liang G,Zhang H,Li X,Ai Q,Yu D
bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana.
J. Exp. Bot., 2017. 68(7): p. 1743-1755
[PMID:28369511] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
Plant Cell, 2018. 30(1): p. 178-195
[PMID:29317470] - Min JH, et al.
Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
Front Plant Sci, 2017. 8: p. 2100
[PMID:29321786] - Samira R, et al.
The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis.
Plant Mol. Biol., 2018. 97(4-5): p. 297-309
[PMID:29882068]
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