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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do023613.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
Trihelix |
Protein Properties |
Length: 286aa MW: 30652.5 Da PI: 8.9537 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do023613.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 73.3 | 4.1e-23 | 27 | 98 | 1 | 71 |
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
rWt++e+l+Li+arr me+r + + p+W++vs+++r++g+er+p qC+++w nl+++ kki ++e+k
Do023613.1 27 RWTRHETLVLIQARRAMERRGLQlPVRPRPKWAAVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEGKL 98
8******************9988355789****************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MMSANENSPL VEAAAAAAST PRSRLPRWTR HETLVLIQAR RAMERRGLQL PVRPRPKWAA 60 VSAYCRRHGV ERGPMQCRKR WGNLSWDLKK IVAWEGKLAS AGPGAGADAA PQHESFWDMC 120 GEQRRARQLP SSFDREVYDA LVCGTSAGGE DATAAALPDL GDGELDGVYR QPPIMVMPIS 180 VTESNKKAGA AASDKNSTSH GGGSGGLKDS DATFVAEAEG TTTATPAATV SIGKQVIEAL 240 ERSNRELAQQ LEAQKSSWRV DREQRAALLG ALDRLAGAVA RIADQL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728031 | 0.0 | KJ728031.1 Zea mays clone pUT6171 trihelix transcription factor (THX11) mRNA, complete cds. |