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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do023024.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
bHLH |
Protein Properties |
Length: 220aa MW: 24003.1 Da PI: 7.0214 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do023024.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.5 | 1e-12 | 61 | 106 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+h e+Er+RRdr+N +f eLr +P+ +++ a+ L A+ YI +L
Do023024.1 61 SHVEAERQRRDRLNRRFCELRAAVPTV-----SRMDRASLLSDATAYIAEL 106
899***********************6.....49**************998 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MSCEVPEQWL VAGDVLDKRD DDDEPLDDGA DNSPSPPEPH AERKSRRGRK PGPRTAGPAS 60 SHVEAERQRR DRLNRRFCEL RAAVPTVSRM DRASLLSDAT AYIAELRGRV KELETEAKTR 120 RMTGAEASQS PQHFSLEVRM VGRDAASLRL TTPAARHAQA PACLMAAIRA LDLLVQNACV 180 CRVGGPTVQD VVVDVPAAGG LLGEDYLRAA LLHRLLQESV
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_B | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_E | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_F | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_G | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_I | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_M | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
5gnj_N | 4e-18 | 61 | 116 | 8 | 63 | Transcription factor MYC2 |
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